DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGTVS
Uniprot ID:
Q12802
Source protein:
A-kinase anchor protein 13
Source gene:
AKAP13
Class:
DEG_SCF_TRCP1_1
Location:
390:395
E3 ligase:
BTRC
DEGRON score:
0.9959
ASA_SCORE:
69.3333
COIL:
0.8238
CONS_SCORE:
0.3128
DSS_SCORE:
0.5522
HELIX:
0.041
FCONS_SCORE:
0.9703
RIG_SCORE:
0.6972
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S395Y
TCGA-A5-A0G2
UCEC
TCGA
DSGTVS
DEG_SCF_TRCP1_1
0.8231
p.S395Y
DO41235
UCEC
ICGC
DSGTVS
DEG_SCF_TRCP1_1
0.8231
p.V389M
TCGA-AP-A1DK
UCEC
TCGA
DSGTVS
DEG_SCF_TRCP1_1
0.3056
p.V389M
DO42033
UCEC
ICGC
DSGTVS
DEG_SCF_TRCP1_1
0.3056
p.V389M
SIDM00658
Non-Small Cell Lung Carcinoma
GDSC
DSGTVS
DEG_SCF_TRCP1_1
0.3056
p.V389M
ACH-000852
Lung Cancer
CCLE
DSGTVS
DEG_SCF_TRCP1_1
0.3056
p.V389M
NCI-H1435
lung
COSMIC
DSGTVS
DEG_SCF_TRCP1_1
0.3056
p.V391G
DO22978
LIHC
ICGC
DSGTVS
DEG_SCF_TRCP1_1
0.7532
p.T396A
DO45299
LIRI
ICGC
DSGTVS
DEG_SCF_TRCP1_1
0.3056
p.R381S
DO23612
LUAD
ICGC
DSGTVS
DEG_SCF_TRCP1_1
0.0833
p.L404V
DO228465
MALY
ICGC
DSGTVS
DEG_SCF_TRCP1_1
0.0833
p.V400I
DO47309
SKCM
ICGC
DSGTVS
DEG_SCF_TRCP1_1
0.1944
p.V400I
DO223286
UCEC
ICGC
DSGTVS
DEG_SCF_TRCP1_1
0.1944
p.R394Q
DO41572
UCEC
ICGC
DSGTVS
DEG_SCF_TRCP1_1
0.7329
p.G380A
SIDM00369
Esophageal Squamous Cell Carcinoma
GDSC
DSGTVS
DEG_SCF_TRCP1_1
0.0556
p.G380A
SIDM00239
Kidney Carcinoma
GDSC
DSGTVS
DEG_SCF_TRCP1_1
0.0556
p.G380A
SIDM01335
Kidney Carcinoma
GDSC
DSGTVS
DEG_SCF_TRCP1_1
0.0556
p.G380A
OS-RC-2
kidney
COSMIC
DSGTVS
DEG_SCF_TRCP1_1
0.0556
p.G380A
TE-1
oesophagus
COSMIC
DSGTVS
DEG_SCF_TRCP1_1
0.0556
p.Q397P
SIDM00685
Glioblastoma
GDSC
DSGTVS
DEG_SCF_TRCP1_1
0.2778
p.Q397P
ACH-000819
Brain Cancer
CCLE
DSGTVS
DEG_SCF_TRCP1_1
0.2778
p.Q397P
LN-18
central_nervous_system
COSMIC
DSGTVS
DEG_SCF_TRCP1_1
0.2778
Drug responses associated with AKAP13 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGTVS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q12802
A-kinase anchor protein 13
DEG_SCF_TRCP1_1
390:395
DSGTVS
BTRC
0.9959
More...
Q9NUP1
Biogenesis of lysosome-related organelles complex 1 subunit 4
DEG_SCF_TRCP1_1
29:34
DSGTVS
BTRC
0.6321
More...