DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
EKENI
Uniprot ID:
Q05586
Source protein:
Glutamate receptor ionotropic, NMDA 1
Source gene:
GRIN1
Class:
DEG_APCC_KENBOX_2
Location:
297:301
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7177
ASA_SCORE:
95.78
COIL:
0.6644
CONS_SCORE:
0.3767
DSS_SCORE:
0.3698
HELIX:
0.3224
FCONS_SCORE:
1.0755
RIG_SCORE:
0.7916
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G289W
TCGA-05-4417
LUAD
TCGA
EKENI
DEG_APCC_KENBOX_2
0.1111
p.D304N
TCGA-DK-A3IT
BLCA
TCGA
EKENI
DEG_APCC_KENBOX_2
0.25
p.D304N
SIDM01004
Chronic Myelogenous Leukemia
GDSC
EKENI
DEG_APCC_KENBOX_2
0.25
p.D304N
ACH-000983
Leukemia
CCLE
EKENI
DEG_APCC_KENBOX_2
0.25
p.D304N
KCL-22
haematopoietic_and_lymphoid_tissue
COSMIC
EKENI
DEG_APCC_KENBOX_2
0.25
p.K296N
TCGA-F5-6814
READ
TCGA
EKENI
DEG_APCC_KENBOX_2
0.3056
p.E294K
DO48404
BLCA
ICGC
EKENI
DEG_APCC_KENBOX_2
0.25
p.E297Q
DO481
BLCA
ICGC
EKENI
DEG_APCC_KENBOX_2
0.5633
p.E297Q
DO45441
LUSC
ICGC
EKENI
DEG_APCC_KENBOX_2
0.5633
p.P305L
DO10582
COAD
ICGC
EKENI
DEG_APCC_KENBOX_2
0.2222
p.A291S
DO229009
LICA
ICGC
EKENI
DEG_APCC_KENBOX_2
0.1667
p.H293L
DO219265
PRAD
ICGC
EKENI
DEG_APCC_KENBOX_2
0.2222
p.A305V
SIDM00537
Colorectal Carcinoma
GDSC
EKENI
DEG_APCC_KENBOX_2
0.2222
p.A305V
ACH-000982
Colon/Colorectal Cancer
CCLE
EKENI
DEG_APCC_KENBOX_2
0.2222
p.A305V
ACH-001345
Colon/Colorectal Cancer
CCLE
EKENI
DEG_APCC_KENBOX_2
0.2222
p.A305V
GP5d
large_intestine
COSMIC
EKENI
DEG_APCC_KENBOX_2
0.2222
p.V306M
SIDM01608
Endometrial Carcinoma
GDSC
EKENI
DEG_APCC_KENBOX_2
0.1944
p.V306M
ACH-000990
Endometrial/Uterine Cancer
CCLE
EKENI
DEG_APCC_KENBOX_2
0.1944
p.T302A
ACH-000971
Colon/Colorectal Cancer
CCLE
EKENI
DEG_APCC_KENBOX_2
0.3056
Drug responses associated with GRIN1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of EKENI
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P78362
SRSF protein kinase 2
DEG_APCC_KENBOX_2
355:359
EKENI
APC,CDC20,FZR1
0.7328
More...
Q05586
Glutamate receptor ionotropic, NMDA 1
DEG_APCC_KENBOX_2
297:301
EKENI
APC,CDC20,FZR1
0.7177
More...