DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
HIR
Uniprot ID:
Q6P3X8
Source protein:
PiggyBac transposable element-derived protein 2
Source gene:
PGBD2
Class:
DEG_APCC_TPR_1
Location:
590:592
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7275
ASA_SCORE:
100.8
COIL:
0.7253
CONS_SCORE:
0.424
DSS_SCORE:
0.5912
HELIX:
0.2733
FCONS_SCORE:
0.9467
RIG_SCORE:
0.8506
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R587S
TCGA-27-2523
GBM
TCGA
HIR
DEG_APCC_TPR_1
0.25
p.E588D
TCGA-34-5234
LUSC
TCGA
HIR
DEG_APCC_TPR_1
0.2778
p.R592Q
TCGA-D5-6540
COAD
TCGA
HIR
DEG_APCC_TPR_1
0.7329
p.C585Y
TCGA-D8-A1JA
BRCA
TCGA
HIR
DEG_APCC_TPR_1
0.1944
p.A583S
TCGA-FD-A5C0
BLCA
TCGA
HIR
DEG_APCC_TPR_1
0.1389
p.R587G
SIDM00487
Colorectal Carcinoma
GDSC
HIR
DEG_APCC_TPR_1
0.25
p.R587G
ACH-000963
Colon/Colorectal Cancer
CCLE
HIR
DEG_APCC_TPR_1
0.25
p.R587G
CCK-81
large_intestine
COSMIC
HIR
DEG_APCC_TPR_1
0.25
Drug responses associated with PGBD2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of HIR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q68DY1
Zinc finger protein 626
DEG_APCC_TPR_1
526:528
HIR
APC,CDC20,FZR1
0.9616
More...
Q6P3X8
PiggyBac transposable element-derived protein 2
DEG_APCC_TPR_1
590:592
HIR
APC,CDC20,FZR1
0.7275
More...