DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
IPKASVKPS
Uniprot ID:
Q86VQ3
Source protein:
Thioredoxin domain-containing protein 2
Source gene:
TXNDC2
Class:
DEG_SIAH_1
Location:
164:172
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.9365
ASA_SCORE:
92.7111
COIL:
0.9569
CONS_SCORE:
0.8011
DSS_SCORE:
0.7247
HELIX:
0.0191
FCONS_SCORE:
1.0088
RIG_SCORE:
0.6019
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G162D
TCGA-DU-A5TU
LGG
TCGA
IPKASVKPS
DEG_SIAH_1
0.2778
p.G162D
DO44579
LGG
ICGC
IPKASVKPS
DEG_SIAH_1
0.2778
p.P180S
TCGA-FS-A1YW
SKCM
TCGA
IPKASVKPS
DEG_SIAH_1
0.1111
p.P180S
DO229341
BTCA
ICGC
IPKASVKPS
DEG_SIAH_1
0.1111
p.P180S
DO227489
LAML
ICGC
IPKASVKPS
DEG_SIAH_1
0.1111
p.P180S
DO228659
LICA
ICGC
IPKASVKPS
DEG_SIAH_1
0.1111
p.P180S
DO50815
LIRI
ICGC
IPKASVKPS
DEG_SIAH_1
0.1111
p.P180S
DO37734
SKCM
ICGC
IPKASVKPS
DEG_SIAH_1
0.1111
p.I157T
TCGA-MI-A75I
LIHC
TCGA
IPKASVKPS
DEG_SIAH_1
0.1389
p.I157T
DO49712
LIHC
ICGC
IPKASVKPS
DEG_SIAH_1
0.1389
p.A167T
DO228580
GACA
ICGC
IPKASVKPS
DEG_SIAH_1
0.7139
p.A167T
DO227513
LAML
ICGC
IPKASVKPS
DEG_SIAH_1
0.7139
p.A167T
DO228937
LICA
ICGC
IPKASVKPS
DEG_SIAH_1
0.7139
p.A167T
DO228269
MALY
ICGC
IPKASVKPS
DEG_SIAH_1
0.7139
p.A182S
DO227496
LAML
ICGC
IPKASVKPS
DEG_SIAH_1
0.0556
p.A182S
DO228937
LICA
ICGC
IPKASVKPS
DEG_SIAH_1
0.0556
p.A182S
DO229038
LICA
ICGC
IPKASVKPS
DEG_SIAH_1
0.0556
p.P165A
DO227513
LAML
ICGC
IPKASVKPS
DEG_SIAH_1
0.7503
p.P165A
DO228915
LICA
ICGC
IPKASVKPS
DEG_SIAH_1
0.7503
p.P165A
DO228918
LICA
ICGC
IPKASVKPS
DEG_SIAH_1
0.7503
p.P165A
DO228917
LICA
ICGC
IPKASVKPS
DEG_SIAH_1
0.7503
p.G177S
DO224621
LUSC
ICGC
IPKASVKPS
DEG_SIAH_1
0.1944
p.P171L
DO52365
LUSC
ICGC
IPKASVKPS
DEG_SIAH_1
0.7582
p.P174L
SIDM01242
Melanoma
GDSC
IPKASVKPS
DEG_SIAH_1
0.2778
p.P174L
ACH-002084
Skin Cancer
CCLE
IPKASVKPS
DEG_SIAH_1
0.2778
p.P174L
ACH-002162
Skin Cancer
CCLE
IPKASVKPS
DEG_SIAH_1
0.2778
p.P174L
MMAC-SF
skin
COSMIC
IPKASVKPS
DEG_SIAH_1
0.2778
p.P174S
SIDM00598
Squamous Cell Lung Carcinoma
GDSC
IPKASVKPS
DEG_SIAH_1
0.2778
p.P174S
ACH-000843
Lung Cancer
CCLE
IPKASVKPS
DEG_SIAH_1
0.2778
p.P174S
HARA
lung
COSMIC
IPKASVKPS
DEG_SIAH_1
0.2778
p.P159H
SIDM01653
Non-Cancerous
GDSC
IPKASVKPS
DEG_SIAH_1
0.1944
p.P159H
SIDM01019
Acute Myeloid Leukemia
GDSC
IPKASVKPS
DEG_SIAH_1
0.1944
p.P159H
SIDM00970
Bladder Carcinoma
GDSC
IPKASVKPS
DEG_SIAH_1
0.1944
p.P159H
SIDM00207
Glioblastoma
GDSC
IPKASVKPS
DEG_SIAH_1
0.1944
p.P159H
SIDM01762
Esophageal Squamous Cell Carcinoma
GDSC
IPKASVKPS
DEG_SIAH_1
0.1944
Drug responses associated with TXNDC2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IPKASVKPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q86VQ3
Thioredoxin domain-containing protein 2
DEG_SIAH_1
164:172
IPKASVKPS
SIAH1,SIAH2,SIAH3
0.9365
More...
Q86VQ3
Thioredoxin domain-containing protein 2
DEG_SIAH_1
269:277
IPKASVKPS
SIAH1,SIAH2,SIAH3
0.942
More...