DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LKPYTE
Uniprot ID:
Q9P0L2
Source protein:
Serine/threonine-protein kinase MARK1
Source gene:
MARK1
Class:
LIG_APCC_ABBA_1
Location:
320:325
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8267
ASA_SCORE:
89.9833
COIL:
0.911
CONS_SCORE:
0.3649
DSS_SCORE:
0.5889
HELIX:
0.0387
FCONS_SCORE:
0.8723
RIG_SCORE:
0.7076
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H315Y
TCGA-17-Z010
LUAD
TCGA
LKPYTE
LIG_APCC_ABBA_1
0.1944
p.E317Q
TCGA-C5-A1M6
CESC
TCGA
LKPYTE
LIG_APCC_ABBA_1
0.25
p.D329N
TCGA-C8-A12P
BRCA
TCGA
LKPYTE
LIG_APCC_ABBA_1
0.2222
p.D329N
TCGA-S3-A6ZF
BRCA
TCGA
LKPYTE
LIG_APCC_ABBA_1
0.2222
p.M311L
TCGA-CV-6952
HNSC
TCGA
LKPYTE
LIG_APCC_ABBA_1
0.0833
p.P328L
TCGA-DX-A8BL
SARC
TCGA
LKPYTE
LIG_APCC_ABBA_1
0.25
p.E318A
TCGA-EE-A2MF
SKCM
TCGA
LKPYTE
LIG_APCC_ABBA_1
0.2778
p.D325H
DO218984
BLCA
ICGC
LKPYTE
LIG_APCC_ABBA_1
0.7688
p.R324Q
DO8842
COAD
ICGC
LKPYTE
LIG_APCC_ABBA_1
0.7329
p.R324Q
DO37547
SKCM
ICGC
LKPYTE
LIG_APCC_ABBA_1
0.7329
p.R324Q
DO41133
UCEC
ICGC
LKPYTE
LIG_APCC_ABBA_1
0.7329
p.Q334K
DO228581
GACA
ICGC
LKPYTE
LIG_APCC_ABBA_1
0.1944
p.I332V
DO15166
HNSC
ICGC
LKPYTE
LIG_APCC_ABBA_1
0.1389
p.R313I
DO229031
LICA
ICGC
LKPYTE
LIG_APCC_ABBA_1
0.1389
p.M317I
DO23564
LUAD
ICGC
LKPYTE
LIG_APCC_ABBA_1
0.25
p.D325N
DO47401
SKCM
ICGC
LKPYTE
LIG_APCC_ABBA_1
0.6932
p.D329E
DO229275
THCA
ICGC
LKPYTE
LIG_APCC_ABBA_1
0.2222
p.M311V
SIDM01045
Endometrial Carcinoma
GDSC
LKPYTE
LIG_APCC_ABBA_1
0.0833
p.M311V
ACH-000978
Endometrial/Uterine Cancer
CCLE
LKPYTE
LIG_APCC_ABBA_1
0.0833
p.M311V
EN
endometrium
COSMIC
LKPYTE
LIG_APCC_ABBA_1
0.0833
p.E316K
SIDM00217
Colorectal Carcinoma
GDSC
LKPYTE
LIG_APCC_ABBA_1
0.2222
p.E316K
ACH-000999
Colon/Colorectal Cancer
CCLE
LKPYTE
LIG_APCC_ABBA_1
0.2222
p.E316K
SNU-1040
large_intestine
COSMIC
LKPYTE
LIG_APCC_ABBA_1
0.2222
p.N331S
SIDM01033
Bladder Carcinoma
GDSC
LKPYTE
LIG_APCC_ABBA_1
0.1667
p.N331S
ACH-000486
Bladder Cancer
CCLE
LKPYTE
LIG_APCC_ABBA_1
0.1667
p.N331S
KU-19-19
urinary_tract
COSMIC
LKPYTE
LIG_APCC_ABBA_1
0.1667
p.Y323H
SIDM01318
Hepatocellular Carcinoma
GDSC
LKPYTE
LIG_APCC_ABBA_1
0.6118
p.Y323H
ACH-001318
Liver Cancer
CCLE
LKPYTE
LIG_APCC_ABBA_1
0.6118
p.R335I
SIDM01611
Endometrial Carcinoma
GDSC
LKPYTE
LIG_APCC_ABBA_1
0.0556
p.R335I
ACH-000996
Endometrial/Uterine Cancer
CCLE
LKPYTE
LIG_APCC_ABBA_1
0.0556
p.I316M
TK10
kidney
COSMIC
LKPYTE
LIG_APCC_ABBA_1
0.2222
p.T319A
SNU-1040
large_intestine
COSMIC
LKPYTE
LIG_APCC_ABBA_1
0.3056
p.A323T
HCT-15
large_intestine
COSMIC
LKPYTE
LIG_APCC_ABBA_1
0.7139
Drug responses associated with MARK1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKPYTE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96L34
MAP/microtubule affinity-regulating kinase 4
LIG_APCC_ABBA_1
319:324
LKPYTE
APC,CDC20,FZR1
0.8628
More...
Q9P0L2
Serine/threonine-protein kinase MARK1
LIG_APCC_ABBA_1
320:325
LKPYTE
APC,CDC20,FZR1
0.8267
More...