DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LKTPQVT
Uniprot ID:
Q13342
Source protein:
Nuclear body protein SP140
Source gene:
SP140
Class:
DEG_SCF_FBW7_1
Location:
302:308
E3 ligase:
FBXW7
DEGRON score:
0.9077
ASA_SCORE:
94.5571
COIL:
0.8439
CONS_SCORE:
0.5665
DSS_SCORE:
0.7263
HELIX:
0.0734
FCONS_SCORE:
1.1813
RIG_SCORE:
0.6942
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D296G
TCGA-AX-A1CE
UCEC
TCGA
LKTPQVT
DEG_SCF_FBW7_1
0.1667
p.V307F
TCGA-AX-A2HC
UCEC
TCGA
LKTPQVT
DEG_SCF_FBW7_1
0.5957
p.R295T
TCGA-BR-4361
STAD
TCGA
LKTPQVT
DEG_SCF_FBW7_1
0.1389
p.G311E
TCGA-D3-A2JK
SKCM
TCGA
LKTPQVT
DEG_SCF_FBW7_1
0.25
p.E310K
TCGA-DK-A1AE
BLCA
TCGA
LKTPQVT
DEG_SCF_FBW7_1
0.2778
p.D301N
TCGA-EE-A180
SKCM
TCGA
LKTPQVT
DEG_SCF_FBW7_1
0.3056
p.G294E
TCGA-EE-A29M
SKCM
TCGA
LKTPQVT
DEG_SCF_FBW7_1
0.1111
p.E293Q
TCGA-UY-A9PH
BLCA
TCGA
LKTPQVT
DEG_SCF_FBW7_1
0.0833
p.E307G
DO1275
BRCA
ICGC
LKTPQVT
DEG_SCF_FBW7_1
0.7199
p.C292S
DO233944
GACA
ICGC
LKTPQVT
DEG_SCF_FBW7_1
0.0556
p.E299V
DO228609
LICA
ICGC
LKTPQVT
DEG_SCF_FBW7_1
0.25
p.G301V
DO228971
LICA
ICGC
LKTPQVT
DEG_SCF_FBW7_1
0.3056
p.S318Y
DO45316
LUAD
ICGC
LKTPQVT
DEG_SCF_FBW7_1
0.0556
p.E297K
DO26250
LUAD
ICGC
LKTPQVT
DEG_SCF_FBW7_1
0.3056
p.G309E
DO45515
LUSC
ICGC
LKTPQVT
DEG_SCF_FBW7_1
0.3056
p.E301K
DO220877
MELA
ICGC
LKTPQVT
DEG_SCF_FBW7_1
0.3056
p.P314T
DO46378
OV
ICGC
LKTPQVT
DEG_SCF_FBW7_1
0.1667
p.E299D
DO36556
READ
ICGC
LKTPQVT
DEG_SCF_FBW7_1
0.25
p.E295K
DO37891
SKCM
ICGC
LKTPQVT
DEG_SCF_FBW7_1
0.1389
p.P314S
DO41572
UCEC
ICGC
LKTPQVT
DEG_SCF_FBW7_1
0.1667
p.E316K
DO41379
UCEC
ICGC
LKTPQVT
DEG_SCF_FBW7_1
0.1111
p.N310S
SW962
vulva
COSMIC
LKTPQVT
DEG_SCF_FBW7_1
0.2778
p.H307R
COR-L303
lung
COSMIC
LKTPQVT
DEG_SCF_FBW7_1
0.8244
p.E312A
VMRC-RCW
kidney
COSMIC
LKTPQVT
DEG_SCF_FBW7_1
0.2222
Drug responses associated with SP140 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKTPQVT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13342
Nuclear body protein SP140
DEG_SCF_FBW7_1
302:308
LKTPQVT
FBXW7
0.9077
More...
Q13342
Nuclear body protein SP140
DEG_SCF_FBW7_1
363:369
LKTPQVT
FBXW7
0.923
More...