DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LKTPQVT
Uniprot ID:
Q13342
Source protein:
Nuclear body protein SP140
Source gene:
SP140
Class:
DEG_SCF_FBW7_1
Location:
363:369
E3 ligase:
FBXW7
DEGRON score:
0.923
ASA_SCORE:
87.9714
COIL:
0.7536
CONS_SCORE:
0.4773
DSS_SCORE:
0.5997
HELIX:
0.0701
FCONS_SCORE:
0.9634
RIG_SCORE:
0.7247
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A358S
TCGA-34-5241
LUSC
TCGA
LKTPQVT
DEG_SCF_FBW7_1
0.1944
p.E359D
TCGA-EO-A22R
UCEC
TCGA
LKTPQVT
DEG_SCF_FBW7_1
0.2222
p.E359D
DO9876
COAD
ICGC
LKTPQVT
DEG_SCF_FBW7_1
0.2222
p.E371K
TCGA-FS-A4F0
SKCM
TCGA
LKTPQVT
DEG_SCF_FBW7_1
0.2778
p.S369L
DO49946
CESC
ICGC
LKTPQVT
DEG_SCF_FBW7_1
0.7667
p.H361R
DO9698
COAD
ICGC
LKTPQVT
DEG_SCF_FBW7_1
0.2778
p.H361R
ACH-002095
Lung Cancer
CCLE
LKTPQVT
DEG_SCF_FBW7_1
0.2778
p.H361R
COR-L303
lung
COSMIC
LKTPQVT
DEG_SCF_FBW7_1
0.2778
p.H361N
DO222884
COCA
ICGC
LKTPQVT
DEG_SCF_FBW7_1
0.2778
p.E365K
DO51277
SKCM
ICGC
LKTPQVT
DEG_SCF_FBW7_1
0.7022
p.E366A
ACH-000484
Kidney Cancer
CCLE
LKTPQVT
DEG_SCF_FBW7_1
0.7701
p.E366A
VMRC-RCW
kidney
COSMIC
LKTPQVT
DEG_SCF_FBW7_1
0.7701
p.S356N
ACH-000501
Colon/Colorectal Cancer
CCLE
LKTPQVT
DEG_SCF_FBW7_1
0.1389
p.P362Q
ACH-000765
Skin Cancer
CCLE
LKTPQVT
DEG_SCF_FBW7_1
0.3056
p.N364S
ACH-002200
Skin Cancer
CCLE
LKTPQVT
DEG_SCF_FBW7_1
0.7069
p.N364S
SW962
vulva
COSMIC
LKTPQVT
DEG_SCF_FBW7_1
0.7069
p.A363V
SNU-407
large_intestine
COSMIC
LKTPQVT
DEG_SCF_FBW7_1
0.6936
p.D368Y
NCI-H1876
lung
COSMIC
LKTPQVT
DEG_SCF_FBW7_1
0.7325
p.S353N
NCI-H1435
lung
COSMIC
LKTPQVT
DEG_SCF_FBW7_1
0.0556
Drug responses associated with SP140 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKTPQVT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13342
Nuclear body protein SP140
DEG_SCF_FBW7_1
302:308
LKTPQVT
FBXW7
0.9077
More...
Q13342
Nuclear body protein SP140
DEG_SCF_FBW7_1
363:369
LKTPQVT
FBXW7
0.923
More...