DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
LPPYQD
Uniprot ID:
P43699
Source protein:
Homeobox protein Nkx-2.1
Source gene:
NKX2-1
Class:
LIG_APCC_ABBA_1
Location:
97:102
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8332
ASA_SCORE:
40.2167
COIL:
0.8308
CONS_SCORE:
0.4973
DSS_SCORE:
0.5174
HELIX:
0.1193
FCONS_SCORE:
0.9883
RIG_SCORE:
0.7487
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A102E
TCGA-YA-A8S7
LIHC
TCGA
LPPYQD
LIG_APCC_ABBA_1
0.7701
p.D102N
DO219201
LUSC
ICGC
LPPYQD
LIG_APCC_ABBA_1
0.6932
p.P98L
DO234250
ESAD
ICGC
LPPYQD
LIG_APCC_ABBA_1
0.6471
p.P98L
DO233767
GACA
ICGC
LPPYQD
LIG_APCC_ABBA_1
0.6471
p.G92C
DO22518
LGG
ICGC
LPPYQD
LIG_APCC_ABBA_1
0.1944
p.G92D
ACH-002166
Skin Cancer
CCLE
LPPYQD
LIG_APCC_ABBA_1
0.1944
p.G92D
MZ7-mel
skin
COSMIC
LPPYQD
LIG_APCC_ABBA_1
0.1944
p.S109L
TCGA-98-A53J
LUSC
TCGA
LPPYQD
LIG_APCC_ABBA_1
0.1389
p.N90T
DO234363
ESAD
ICGC
LPPYQD
LIG_APCC_ABBA_1
0.1389
p.P111T
DO229018
LICA
ICGC
LPPYQD
LIG_APCC_ABBA_1
0.0833
p.A87T
TCGA-FU-A3HZ
CESC
TCGA
LPPYQD
LIG_APCC_ABBA_1
0.0556
p.A112T
SIDM00272
Breast Carcinoma
GDSC
LPPYQD
LIG_APCC_ABBA_1
0.0556
p.A112T
SIDM01617
Endometrial Carcinoma
GDSC
LPPYQD
LIG_APCC_ABBA_1
0.0556
Showing 1 to 13 of 13 entries
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Drug responses associated with NKX2-1 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
No data available in table
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All proteins holding degron of LPPYQD
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6ZTR5
Cilia- and flagella-associated protein 47
LIG_APCC_ABBA_1
1453:1458
LPPYQD
APC,CDC20,FZR1
0.6371
More...
P43699
Homeobox protein Nkx-2.1
LIG_APCC_ABBA_1
97:102
LPPYQD
APC,CDC20,FZR1
0.8332
More...
Showing 1 to 2 of 2 entries
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