DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LPPYQD
Uniprot ID:
Q6ZTR5
Source protein:
Cilia- and flagella-associated protein 47
Source gene:
CFAP47
Class:
LIG_APCC_ABBA_1
Location:
1453:1458
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6371
ASA_SCORE:
80.4667
COIL:
0.7048
CONS_SCORE:
0
DSS_SCORE:
0.6113
HELIX:
0.0808
FCONS_SCORE:
0
RIG_SCORE:
0.6996
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D1458E
SIDM00871
Non-Cancerous
GDSC
LPPYQD
LIG_APCC_ABBA_1
0.5647
p.D1458E
SIDM00872
Breast Carcinoma
GDSC
LPPYQD
LIG_APCC_ABBA_1
0.5647
p.D1458V
SIDM00528
Breast Carcinoma
GDSC
LPPYQD
LIG_APCC_ABBA_1
0.7785
Drug responses associated with CFAP47 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPPYQD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P43699
Homeobox protein Nkx-2.1
LIG_APCC_ABBA_1
97:102
LPPYQD
APC,CDC20,FZR1
0.8332
More...
Q6ZTR5
Cilia- and flagella-associated protein 47
LIG_APCC_ABBA_1
1453:1458
LPPYQD
APC,CDC20,FZR1
0.6371
More...