DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LPTPALS
Uniprot ID:
O00203
Source protein:
AP-3 complex subunit beta-1
Source gene:
AP3B1
Class:
DEG_SCF_FBW7_1
Location:
833:839
E3 ligase:
FBXW7
DEGRON score:
0.9569
ASA_SCORE:
74.5
COIL:
0.9104
CONS_SCORE:
0.2086
DSS_SCORE:
0.3559
HELIX:
0.0303
FCONS_SCORE:
0.9106
RIG_SCORE:
0.7518
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G848D
TCGA-2W-A8YY
CESC
TCGA
LPTPALS
DEG_SCF_FBW7_1
0.0833
p.G848D
DO223732
CESC
ICGC
LPTPALS
DEG_SCF_FBW7_1
0.0833
p.L842F
TCGA-95-7944
LUAD
TCGA
LPTPALS
DEG_SCF_FBW7_1
0.25
p.L842F
DO25163
LUAD
ICGC
LPTPALS
DEG_SCF_FBW7_1
0.25
p.V827L
TCGA-BH-A0DQ
BRCA
TCGA
LPTPALS
DEG_SCF_FBW7_1
0.1667
p.V827L
DO1502
BRCA
ICGC
LPTPALS
DEG_SCF_FBW7_1
0.1667
p.L846I
TCGA-CR-7370
HNSC
TCGA
LPTPALS
DEG_SCF_FBW7_1
0.1389
p.L846I
DO14426
HNSC
ICGC
LPTPALS
DEG_SCF_FBW7_1
0.1389
p.A837D
TCGA-DX-A6YV
SARC
TCGA
LPTPALS
DEG_SCF_FBW7_1
0.6682
p.A837D
DO220011
SARC
ICGC
LPTPALS
DEG_SCF_FBW7_1
0.6682
p.D823V
DO225233
BRCA
ICGC
LPTPALS
DEG_SCF_FBW7_1
0.0556
p.M843V
DO231983
LICA
ICGC
LPTPALS
DEG_SCF_FBW7_1
0.2222
p.T835K
DO229041
LICA
ICGC
LPTPALS
DEG_SCF_FBW7_1
0.7306
p.T835K
DO229008
LICA
ICGC
LPTPALS
DEG_SCF_FBW7_1
0.7306
p.P840S
SIDM00217
Colorectal Carcinoma
GDSC
LPTPALS
DEG_SCF_FBW7_1
0.3056
p.P840S
SNU-1040
large_intestine
COSMIC
LPTPALS
DEG_SCF_FBW7_1
0.3056
Drug responses associated with AP3B1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPTPALS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00203
AP-3 complex subunit beta-1
DEG_SCF_FBW7_1
833:839
LPTPALS
FBXW7
0.9569
More...
Q9H3S7
Tyrosine-protein phosphatase non-receptor type 23
DEG_SCF_FBW7_1
540:546
LPTPALS
FBXW7
0.8823
More...