DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
LRPFPD
Uniprot ID:
P43268
Source protein:
ETS translocation variant 4
Source gene:
ETV4
Class:
LIG_APCC_ABBA_1
Location:
303:308
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9923
ASA_SCORE:
80.9333
COIL:
0.8772
CONS_SCORE:
0.4965
DSS_SCORE:
0.3484
HELIX:
0.0557
FCONS_SCORE:
1.1188
RIG_SCORE:
0.7689
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P305S
TCGA-2W-A8YY
CESC
TCGA
LRPFPD
LIG_APCC_ABBA_1
0.6752
p.E300D
TCGA-D1-A16X
UCEC
TCGA
LRPFPD
LIG_APCC_ABBA_1
0.25
p.V312L
TCGA-D3-A1QB
SKCM
TCGA
LRPFPD
LIG_APCC_ABBA_1
0.2222
p.F317S
TCGA-EO-A22R
UCEC
TCGA
LRPFPD
LIG_APCC_ABBA_1
0.0833
p.V310F
TCGA-Z2-AA3S
SKCM
TCGA
LRPFPD
LIG_APCC_ABBA_1
0.2778
p.R299W
DO223732
CESC
ICGC
LRPFPD
LIG_APCC_ABBA_1
0.2222
p.R299W
DO47925
STAD
ICGC
LRPFPD
LIG_APCC_ABBA_1
0.2222
p.R299W
SNU-1040
large_intestine
COSMIC
LRPFPD
LIG_APCC_ABBA_1
0.2222
p.R298H
DO233652
GACA
ICGC
LRPFPD
LIG_APCC_ABBA_1
0.1944
p.L302P
DO11166
GBM
ICGC
LRPFPD
LIG_APCC_ABBA_1
0.3056
p.Q306K
DO229015
LICA
ICGC
LRPFPD
LIG_APCC_ABBA_1
0.6944
p.A318D
DO229022
LICA
ICGC
LRPFPD
LIG_APCC_ABBA_1
0.0556
p.R298C
DO50118
STAD
ICGC
LRPFPD
LIG_APCC_ABBA_1
0.1944
p.F307Y
DO43290
UCEC
ICGC
LRPFPD
LIG_APCC_ABBA_1
0.7528
p.V312I
SIDM00845
Burkitt's Lymphoma
GDSC
LRPFPD
LIG_APCC_ABBA_1
0.2222
p.V312I
SIDM01519
Head and Neck Carcinoma
GDSC
LRPFPD
LIG_APCC_ABBA_1
0.2222
p.V310I
SIDM01617
Endometrial Carcinoma
GDSC
LRPFPD
LIG_APCC_ABBA_1
0.2778
p.H304N
ACH-000955
Colon/Colorectal Cancer
CCLE
LRPFPD
LIG_APCC_ABBA_1
0.7423
p.H304N
SNU-407
large_intestine
COSMIC
LRPFPD
LIG_APCC_ABBA_1
0.7423
Drug responses associated with ETV4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRPFPD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P43268
ETS translocation variant 4
LIG_APCC_ABBA_1
303:308
LRPFPD
APC,CDC20,FZR1
0.9923
More...
Q96M15
Putative uncharacterized protein IGF2BP2-AS1
LIG_APCC_ABBA_1
9:14
LRPFPD
APC,CDC20,FZR1
0.6215
More...