DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
LSPYGD
Uniprot ID:
Q7Z7J9
Source protein:
Calcium/calmodulin-dependent protein kinase II inhibitor 1
Source gene:
CAMK2N1
Class:
LIG_APCC_ABBA_1
Location:
12:17
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9193
ASA_SCORE:
62.1
COIL:
0.8132
CONS_SCORE:
0.858
DSS_SCORE:
0.4378
HELIX:
0.0455
FCONS_SCORE:
0.962
RIG_SCORE:
0.6841
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P14L
TCGA-EE-A2GH
SKCM
TCGA
LSPYGD
LIG_APCC_ABBA_1
0.6471
p.P14L
DO37643
SKCM
ICGC
LSPYGD
LIG_APCC_ABBA_1
0.6471
p.P14S
TCGA-EE-A2GH
SKCM
TCGA
LSPYGD
LIG_APCC_ABBA_1
0.6752
p.P14S
DO37643
SKCM
ICGC
LSPYGD
LIG_APCC_ABBA_1
0.6752
p.G16S
TCGA-FR-A726
SKCM
TCGA
LSPYGD
LIG_APCC_ABBA_1
0.5882
p.G16S
DO48665
SKCM
ICGC
LSPYGD
LIG_APCC_ABBA_1
0.5882
p.Q23R
DO227987
COCA
ICGC
LSPYGD
LIG_APCC_ABBA_1
0.1667
p.I24M
DO15414
HNSC
ICGC
LSPYGD
LIG_APCC_ABBA_1
0.1389
p.G19S
DO229048
LICA
ICGC
LSPYGD
LIG_APCC_ABBA_1
0.2778
Drug responses associated with CAMK2N1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LSPYGD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BY10
Thymic stromal cotransporter homolog
LIG_APCC_ABBA_1
466:471
LSPYGD
APC,CDC20,FZR1
0.5078
More...
Q7Z7J9
Calcium/calmodulin-dependent protein kinase II inhibitor 1
LIG_APCC_ABBA_1
12:17
LSPYGD
APC,CDC20,FZR1
0.9193
More...