DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
LSPYGD
Uniprot ID:
Q9BY10
Source protein:
Thymic stromal cotransporter homolog
Source gene:
SLC46A2
Class:
LIG_APCC_ABBA_1
Location:
466:471
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5078
ASA_SCORE:
99.9333
COIL:
0.9128
CONS_SCORE:
0.3364
DSS_SCORE:
0.156
HELIX:
0.0642
FCONS_SCORE:
0.7132
RIG_SCORE:
0.7998
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E474D
TCGA-EO-A22X
UCEC
TCGA
LSPYGD
LIG_APCC_ABBA_1
0.25
p.E474D
DO43907
UCEC
ICGC
LSPYGD
LIG_APCC_ABBA_1
0.25
p.D471E
DO228948
LICA
ICGC
LSPYGD
LIG_APCC_ABBA_1
0.5647
p.P468Q
DO229015
LICA
ICGC
LSPYGD
LIG_APCC_ABBA_1
0.7035
p.S457N
DO232224
PBCA
ICGC
LSPYGD
LIG_APCC_ABBA_1
0.0833
p.V459M
SIDM00061
Ovarian Carcinoma
GDSC
LSPYGD
LIG_APCC_ABBA_1
0.1389
p.V459M
SIDM01149
Small Cell Lung Carcinoma
GDSC
LSPYGD
LIG_APCC_ABBA_1
0.1389
p.V459M
SIDM00230
Small Cell Lung Carcinoma
GDSC
LSPYGD
LIG_APCC_ABBA_1
0.1389
p.V459M
SIDM00102
Mesothelioma
GDSC
LSPYGD
LIG_APCC_ABBA_1
0.1389
p.V459M
SIDM00796
Head and Neck Carcinoma
GDSC
LSPYGD
LIG_APCC_ABBA_1
0.1389
p.V459M
SIDM00516
Melanoma
GDSC
LSPYGD
LIG_APCC_ABBA_1
0.1389
p.V459M
SIDM01051
Ovarian Carcinoma
GDSC
LSPYGD
LIG_APCC_ABBA_1
0.1389
p.V459M
SIDM00622
Glioblastoma
GDSC
LSPYGD
LIG_APCC_ABBA_1
0.1389
p.V459M
SIDM01012
Other Blood Cancers
GDSC
LSPYGD
LIG_APCC_ABBA_1
0.1389
p.V459M
SIDM01879
Non-Cancerous
GDSC
LSPYGD
LIG_APCC_ABBA_1
0.1389
p.V459M
SIDM01228
Melanoma
GDSC
LSPYGD
LIG_APCC_ABBA_1
0.1389
p.V459M
SIDM00137
Non-Small Cell Lung Carcinoma
GDSC
LSPYGD
LIG_APCC_ABBA_1
0.1389
p.V459M
SIDM01598
Non-Small Cell Lung Carcinoma
GDSC
LSPYGD
LIG_APCC_ABBA_1
0.1389
Drug responses associated with SLC46A2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LSPYGD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BY10
Thymic stromal cotransporter homolog
LIG_APCC_ABBA_1
466:471
LSPYGD
APC,CDC20,FZR1
0.5078
More...
Q7Z7J9
Calcium/calmodulin-dependent protein kinase II inhibitor 1
LIG_APCC_ABBA_1
12:17
LSPYGD
APC,CDC20,FZR1
0.9193
More...