DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPDDS
Uniprot ID:
Q13255
Source protein:
Metabotropic glutamate receptor 1
Source gene:
GRM1
Class:
DEG_SCF_FBW7_1
Location:
1137:1142
E3 ligase:
FBXW7
DEGRON score:
0.9004
ASA_SCORE:
63.7667
COIL:
0.814
CONS_SCORE:
0.2653
DSS_SCORE:
0.7713
HELIX:
0.1672
FCONS_SCORE:
0.9959
RIG_SCORE:
0.6232
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D1130Y
TCGA-2V-A95S
LIHC
TCGA
LTPDDS
DEG_SCF_FBW7_1
0.1389
p.D1130Y
DO223911
LIHC
ICGC
LTPDDS
DEG_SCF_FBW7_1
0.1389
p.E1128K
TCGA-5L-AAT1
BRCA
TCGA
LTPDDS
DEG_SCF_FBW7_1
0.0833
p.E1128K
TCGA-77-8143
LUSC
TCGA
LTPDDS
DEG_SCF_FBW7_1
0.0833
p.E1128K
DO219594
BRCA
ICGC
LTPDDS
DEG_SCF_FBW7_1
0.0833
p.E1128K
DO27247
LUSC
ICGC
LTPDDS
DEG_SCF_FBW7_1
0.0833
p.D1141N
TCGA-77-7337
LUSC
TCGA
LTPDDS
DEG_SCF_FBW7_1
0.5821
p.D1141N
TCGA-97-7546
LUAD
TCGA
LTPDDS
DEG_SCF_FBW7_1
0.5821
p.D1141N
DO23762
LUAD
ICGC
LTPDDS
DEG_SCF_FBW7_1
0.5821
p.D1141N
DO27445
LUSC
ICGC
LTPDDS
DEG_SCF_FBW7_1
0.5821
p.R1152H
TCGA-AX-A2HC
UCEC
TCGA
LTPDDS
DEG_SCF_FBW7_1
0.0556
p.R1152H
DO50385
ESAD
ICGC
LTPDDS
DEG_SCF_FBW7_1
0.0556
p.R1152H
DO232761
PBCA
ICGC
LTPDDS
DEG_SCF_FBW7_1
0.0556
p.R1152H
DO41572
UCEC
ICGC
LTPDDS
DEG_SCF_FBW7_1
0.0556
p.S1149L
TCGA-BA-6869
HNSC
TCGA
LTPDDS
DEG_SCF_FBW7_1
0.1389
p.S1149L
DO14250
HNSC
ICGC
LTPDDS
DEG_SCF_FBW7_1
0.1389
p.P1143H
TCGA-CG-4306
STAD
TCGA
LTPDDS
DEG_SCF_FBW7_1
0.3056
p.P1143H
DO38567
STAD
ICGC
LTPDDS
DEG_SCF_FBW7_1
0.3056
p.E1127V
TCGA-CN-A63U
HNSC
TCGA
LTPDDS
DEG_SCF_FBW7_1
0.0556
p.E1127V
DO44454
HNSC
ICGC
LTPDDS
DEG_SCF_FBW7_1
0.0556
p.P1143S
TCGA-CR-7398
HNSC
TCGA
LTPDDS
DEG_SCF_FBW7_1
0.3056
p.P1143S
DO14782
HNSC
ICGC
LTPDDS
DEG_SCF_FBW7_1
0.3056
p.A1144V
TCGA-D1-A103
UCEC
TCGA
LTPDDS
DEG_SCF_FBW7_1
0.2778
p.A1144V
TCGA-EO-A22R
UCEC
TCGA
LTPDDS
DEG_SCF_FBW7_1
0.2778
p.A1144V
DO227609
COCA
ICGC
LTPDDS
DEG_SCF_FBW7_1
0.2778
p.A1144V
DO52652
MALY
ICGC
LTPDDS
DEG_SCF_FBW7_1
0.2778
p.A1144V
DO42312
UCEC
ICGC
LTPDDS
DEG_SCF_FBW7_1
0.2778
p.A1144V
DO42713
UCEC
ICGC
LTPDDS
DEG_SCF_FBW7_1
0.2778
p.R1152S
TCGA-EE-A2MS
SKCM
TCGA
LTPDDS
DEG_SCF_FBW7_1
0.0556
p.R1152S
DO37567
SKCM
ICGC
LTPDDS
DEG_SCF_FBW7_1
0.0556
p.A1133V
TCGA-R6-A8WC
ESCA
TCGA
LTPDDS
DEG_SCF_FBW7_1
0.2222
p.T1146M
DO222383
BTCA
ICGC
LTPDDS
DEG_SCF_FBW7_1
0.2222
p.P1139Q
DO233737
GACA
ICGC
LTPDDS
DEG_SCF_FBW7_1
0.7035
p.A1144G
DO46850
RECA
ICGC
LTPDDS
DEG_SCF_FBW7_1
0.2778
p.P1148S
SIDM01175
Other Sarcomas
GDSC
LTPDDS
DEG_SCF_FBW7_1
0.1667
p.P1148S
ACH-002309
Sarcoma
CCLE
LTPDDS
DEG_SCF_FBW7_1
0.1667
p.P1148S
SW684
soft_tissue
COSMIC
LTPDDS
DEG_SCF_FBW7_1
0.1667
p.E1127D
SIDM00889
Cervical Carcinoma
GDSC
LTPDDS
DEG_SCF_FBW7_1
0.0556
p.E1127D
ACH-001333
Cervical Cancer
CCLE
LTPDDS
DEG_SCF_FBW7_1
0.0556
p.E1127D
C-33-A
cervix
COSMIC
LTPDDS
DEG_SCF_FBW7_1
0.0556
p.D1130V
SIDM00282
Colorectal Carcinoma
GDSC
LTPDDS
DEG_SCF_FBW7_1
0.1389
p.D1130V
ACH-000998
Colon/Colorectal Cancer
CCLE
LTPDDS
DEG_SCF_FBW7_1
0.1389
p.D1130V
CW-2
large_intestine
COSMIC
LTPDDS
DEG_SCF_FBW7_1
0.1389
p.D1141G
SIDM00537
Colorectal Carcinoma
GDSC
LTPDDS
DEG_SCF_FBW7_1
0.6087
p.D1141G
ACH-000982
Colon/Colorectal Cancer
CCLE
LTPDDS
DEG_SCF_FBW7_1
0.6087
p.D1141G
ACH-001345
Colon/Colorectal Cancer
CCLE
LTPDDS
DEG_SCF_FBW7_1
0.6087
p.D1141G
GP5d
large_intestine
COSMIC
LTPDDS
DEG_SCF_FBW7_1
0.6087
p.T1146K
SIDM00727
Non-Small Cell Lung Carcinoma
GDSC
LTPDDS
DEG_SCF_FBW7_1
0.2222
p.T1146K
ACH-000951
Lung Cancer
CCLE
LTPDDS
DEG_SCF_FBW7_1
0.2222
p.T1146K
NCI-H2342
lung
COSMIC
LTPDDS
DEG_SCF_FBW7_1
0.2222
Drug responses associated with GRM1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPDDS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13255
Metabotropic glutamate receptor 1
DEG_SCF_FBW7_1
1137:1142
LTPDDS
FBXW7
0.9004
More...
Q8WXH2
Junctophilin-3
DEG_SCF_FBW7_1
470:475
LTPDDS
FBXW7
0.9782
More...