DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPGAE
Uniprot ID:
Q8N4U5
Source protein:
T-complex protein 11-like protein 2
Source gene:
TCP11L2
Class:
DEG_SCF_FBW7_2
Location:
283:288
E3 ligase:
FBXW7
DEGRON score:
0.949
ASA_SCORE:
75.0333
COIL:
0.8038
CONS_SCORE:
0.3748
DSS_SCORE:
0.515
HELIX:
0.1557
FCONS_SCORE:
1.3565
RIG_SCORE:
0.6409
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S279A
TCGA-55-7911
LUAD
TCGA
LTPGAE
DEG_SCF_FBW7_2
0.2222
p.S279A
DO24821
LUAD
ICGC
LTPGAE
DEG_SCF_FBW7_2
0.2222
p.E273K
TCGA-AG-4001
READ
TCGA
LTPGAE
DEG_SCF_FBW7_2
0.0556
p.E273K
TCGA-BG-A222
UCEC
TCGA
LTPGAE
DEG_SCF_FBW7_2
0.0556
p.E273K
DO220910
MELA
ICGC
LTPGAE
DEG_SCF_FBW7_2
0.0556
p.E273K
DO36654
READ
ICGC
LTPGAE
DEG_SCF_FBW7_2
0.0556
p.E273K
DO42977
UCEC
ICGC
LTPGAE
DEG_SCF_FBW7_2
0.0556
p.L295M
TCGA-AP-A1DK
UCEC
TCGA
LTPGAE
DEG_SCF_FBW7_2
0.1389
p.L295M
DO42033
UCEC
ICGC
LTPGAE
DEG_SCF_FBW7_2
0.1389
p.L295P
TCGA-BR-8591
STAD
TCGA
LTPGAE
DEG_SCF_FBW7_2
0.1389
p.L295P
DO47973
STAD
ICGC
LTPGAE
DEG_SCF_FBW7_2
0.1389
p.E274D
TCGA-CS-6668
LGG
TCGA
LTPGAE
DEG_SCF_FBW7_2
0.0833
p.E274D
DO22548
LGG
ICGC
LTPGAE
DEG_SCF_FBW7_2
0.0833
p.A287D
TCGA-D8-A1JD
BRCA
TCGA
LTPGAE
DEG_SCF_FBW7_2
0.6682
p.A287D
DO1697
BRCA
ICGC
LTPGAE
DEG_SCF_FBW7_2
0.6682
p.E288K
TCGA-EE-A2MR
SKCM
TCGA
LTPGAE
DEG_SCF_FBW7_2
0.7022
p.E288K
DO37819
SKCM
ICGC
LTPGAE
DEG_SCF_FBW7_2
0.7022
p.S291C
TCGA-XF-A9ST
BLCA
TCGA
LTPGAE
DEG_SCF_FBW7_2
0.25
p.S291C
DO223599
BLCA
ICGC
LTPGAE
DEG_SCF_FBW7_2
0.25
p.L278V
TCGA-XF-A9T0
BLCA
TCGA
LTPGAE
DEG_SCF_FBW7_2
0.1944
p.L278V
DO51920
BLCA
ICGC
LTPGAE
DEG_SCF_FBW7_2
0.1944
p.L278V
ACH-001838
Bile Duct Cancer
CCLE
LTPGAE
DEG_SCF_FBW7_2
0.1944
p.P285H
DO233767
GACA
ICGC
LTPGAE
DEG_SCF_FBW7_2
0.7694
p.A287S
DO229026
LICA
ICGC
LTPGAE
DEG_SCF_FBW7_2
0.6477
p.A282S
SIDM00263
Ewing's Sarcoma
GDSC
LTPGAE
DEG_SCF_FBW7_2
0.3056
p.A282S
ACH-002106
Bone Cancer
CCLE
LTPGAE
DEG_SCF_FBW7_2
0.3056
p.A282S
ES5
bone
COSMIC
LTPGAE
DEG_SCF_FBW7_2
0.3056
Drug responses associated with TCP11L2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPGAE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8TEK3
Histone-lysine N-methyltransferase, H3 lysine-79 specific
DEG_SCF_FBW7_2
956:961
LTPGAE
FBXW7
0.9883
More...
Q8N4U5
T-complex protein 11-like protein 2
DEG_SCF_FBW7_2
283:288
LTPGAE
FBXW7
0.949
More...