DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPPRS
Uniprot ID:
P20393
Source protein:
Nuclear receptor subfamily 1 group D member 1
Source gene:
NR1D1
Class:
DEG_SCF_FBW7_1
Location:
273:278
E3 ligase:
FBXW7
DEGRON score:
0.8756
ASA_SCORE:
87.5667
COIL:
0.9678
CONS_SCORE:
0.415
DSS_SCORE:
0.7866
HELIX:
0.011
FCONS_SCORE:
0.9936
RIG_SCORE:
0.5781
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E282Q
TCGA-C8-A8HP
BRCA
TCGA
LTPPRS
DEG_SCF_FBW7_1
0.2222
p.E282Q
DO219621
BRCA
ICGC
LTPPRS
DEG_SCF_FBW7_1
0.2222
p.F269V
TCGA-CD-8527
STAD
TCGA
LTPPRS
DEG_SCF_FBW7_1
0.2222
p.F269V
DO47739
STAD
ICGC
LTPPRS
DEG_SCF_FBW7_1
0.2222
p.P283A
DO50443
ESAD
ICGC
LTPPRS
DEG_SCF_FBW7_1
0.1944
p.V288M
SIDM00867
Glioblastoma
GDSC
LTPPRS
DEG_SCF_FBW7_1
0.0556
p.V288M
ACH-000863
Brain Cancer
CCLE
LTPPRS
DEG_SCF_FBW7_1
0.0556
p.V288M
DBTRG-05MG
central_nervous_system
COSMIC
LTPPRS
DEG_SCF_FBW7_1
0.0556
Drug responses associated with NR1D1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPPRS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P20393
Nuclear receptor subfamily 1 group D member 1
DEG_SCF_FBW7_1
273:278
LTPPRS
FBXW7
0.8756
More...
Q08AD1
Calmodulin-regulated spectrin-associated protein 2
DEG_SCF_FBW7_1
1003:1008
LTPPRS
FBXW7
0.9991
More...