DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPSPT
Uniprot ID:
O75154
Source protein:
Rab11 family-interacting protein 3
Source gene:
RAB11FIP3
Class:
DEG_SCF_FBW7_1
Location:
419:424
E3 ligase:
FBXW7
DEGRON score:
0.9784
ASA_SCORE:
74.3
COIL:
0.8683
CONS_SCORE:
0.5286
DSS_SCORE:
0.4802
HELIX:
0.1007
FCONS_SCORE:
0.9912
RIG_SCORE:
0.7095
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G412C
TCGA-55-A490
LUAD
TCGA
LTPSPT
DEG_SCF_FBW7_1
0.1389
p.G412C
DO24596
LUAD
ICGC
LTPSPT
DEG_SCF_FBW7_1
0.1389
p.R426Q
TCGA-D6-6515
HNSC
TCGA
LTPSPT
DEG_SCF_FBW7_1
0.2778
p.K425N
TCGA-DX-A6YT
SARC
TCGA
LTPSPT
DEG_SCF_FBW7_1
0.3056
p.R426W
TCGA-EO-A3B0
UCEC
TCGA
LTPSPT
DEG_SCF_FBW7_1
0.2778
p.V419I
DO227906
COCA
ICGC
LTPSPT
DEG_SCF_FBW7_1
0.7076
p.A427V
DO234219
ESAD
ICGC
LTPSPT
DEG_SCF_FBW7_1
0.25
p.D424V
DO52163
LIHC
ICGC
LTPSPT
DEG_SCF_FBW7_1
0.7785
p.S422I
DO50679
ORCA
ICGC
LTPSPT
DEG_SCF_FBW7_1
0.623
p.A417T
SIDM01090
Colorectal Carcinoma
GDSC
LTPSPT
DEG_SCF_FBW7_1
0.2778
p.A417T
ACH-000943
Colon/Colorectal Cancer
CCLE
LTPSPT
DEG_SCF_FBW7_1
0.2778
p.A417T
RKO
large_intestine
COSMIC
LTPSPT
DEG_SCF_FBW7_1
0.2778
Drug responses associated with RAB11FIP3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPSPT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75154
Rab11 family-interacting protein 3
DEG_SCF_FBW7_1
419:424
LTPSPT
FBXW7
0.9784
More...
Q5TG53
Putative uncharacterized protein SERTAD4-AS1
DEG_SCF_FBW7_1
148:153
LTPSPT
FBXW7
0.9566
More...