DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
NLR
Uniprot ID:
Q8NI77
Source protein:
Kinesin-like protein KIF18A
Source gene:
KIF18A
Class:
DEG_APCC_TPR_1
Location:
896:898
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9668
ASA_SCORE:
144.9667
COIL:
0.915
CONS_SCORE:
0.3746
DSS_SCORE:
0.9114
HELIX:
0.068
FCONS_SCORE:
1.0731
RIG_SCORE:
0.7056
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.I892V
TCGA-AR-A0TV
BRCA
TCGA
NLR
DEG_APCC_TPR_1
0.2222
p.I892V
DO4879
BRCA
ICGC
NLR
DEG_APCC_TPR_1
0.2222
p.N891H
TCGA-D3-A8GM
SKCM
TCGA
NLR
DEG_APCC_TPR_1
0.1944
p.N891H
DO50288
SKCM
ICGC
NLR
DEG_APCC_TPR_1
0.1944
p.L897I
TCGA-EO-A3B0
UCEC
TCGA
NLR
DEG_APCC_TPR_1
0.6063
p.L897I
DO219773
UCEC
ICGC
NLR
DEG_APCC_TPR_1
0.6063
p.R886T
SIDM00627
Cervical Carcinoma
GDSC
NLR
DEG_APCC_TPR_1
0.0556
p.R886T
ACH-000490
Cervical Cancer
CCLE
NLR
DEG_APCC_TPR_1
0.0556
p.R886T
ACH-001359
Cervical Cancer
CCLE
NLR
DEG_APCC_TPR_1
0.0556
p.R886T
ME-180
cervix
COSMIC
NLR
DEG_APCC_TPR_1
0.0556
Drug responses associated with KIF18A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of NLR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NI77
Kinesin-like protein KIF18A
DEG_APCC_TPR_1
896:898
NLR
APC,CDC20,FZR1
0.9668
More...
Q9BVV8
Protein FAM174C
DEG_APCC_TPR_1
130:132
NLR
APC,CDC20,FZR1
0.9695
More...