DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
NPDTGE
Uniprot ID:
Q9UN75
Source protein:
Protocadherin alpha-12
Source gene:
PCDHA12
Class:
DEG_Kelch_Keap1_1
Location:
296:301
E3 ligase:
KEAP1
DEGRON score:
0.5991
ASA_SCORE:
63.8667
COIL:
0.8323
CONS_SCORE:
0.6306
DSS_SCORE:
0.2085
HELIX:
0.022
FCONS_SCORE:
1.1999
RIG_SCORE:
0.8003
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P297A
DO50897
LICA
ICGC
NPDTGE
DEG_Kelch_Keap1_1
0.6392
p.D309N
DO220873
MELA
ICGC
NPDTGE
DEG_Kelch_Keap1_1
0.1111
p.E311K
SIDM00842
Colorectal Carcinoma
GDSC
NPDTGE
DEG_Kelch_Keap1_1
0.0556
p.E311K
ACH-000202
Colon/Colorectal Cancer
CCLE
NPDTGE
DEG_Kelch_Keap1_1
0.0556
p.E311K
COLO-320-HSR
large_intestine
COSMIC
NPDTGE
DEG_Kelch_Keap1_1
0.0556
p.G300S
SIDM00327
Hodgkin's Lymphoma
GDSC
NPDTGE
DEG_Kelch_Keap1_1
0.6993
p.G300S
ACH-000754
Lymphoma
CCLE
NPDTGE
DEG_Kelch_Keap1_1
0.6993
p.G300S
L-428
haematopoietic_and_lymphoid_tissue
COSMIC
NPDTGE
DEG_Kelch_Keap1_1
0.6993
p.C291S
ACH-000612
Lymphoma
CCLE
NPDTGE
DEG_Kelch_Keap1_1
0.1944
Drug responses associated with PCDHA12 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of NPDTGE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14517
Protocadherin Fat 1
DEG_Kelch_Keap1_1
3073:3078
NPDTGE
KEAP1
0.6013
More...
Q9UN75
Protocadherin alpha-12
DEG_Kelch_Keap1_1
296:301
NPDTGE
KEAP1
0.5991
More...