DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PATPGAS
Uniprot ID:
P13349
Source protein:
Myogenic factor 5
Source gene:
MYF5
Class:
DEG_SCF_FBW7_1
Location:
240:246
E3 ligase:
FBXW7
DEGRON score:
0.8809
ASA_SCORE:
73.4857
COIL:
0.9364
CONS_SCORE:
0.4859
DSS_SCORE:
0.5288
HELIX:
0.0369
FCONS_SCORE:
1.0723
RIG_SCORE:
0.5995
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T236N
TCGA-05-4424
LUAD
TCGA
PATPGAS
DEG_SCF_FBW7_1
0.2222
p.T236N
TCGA-L9-A7SV
LUAD
TCGA
PATPGAS
DEG_SCF_FBW7_1
0.2222
p.T236N
DO49875
LUAD
ICGC
PATPGAS
DEG_SCF_FBW7_1
0.2222
p.T236N
DO23672
LUAD
ICGC
PATPGAS
DEG_SCF_FBW7_1
0.2222
p.G244A
TCGA-CC-A9FU
LIHC
TCGA
PATPGAS
DEG_SCF_FBW7_1
0.6429
p.G244A
DO52190
LIHC
ICGC
PATPGAS
DEG_SCF_FBW7_1
0.6429
p.A245V
TCGA-E7-A97Q
BLCA
TCGA
PATPGAS
DEG_SCF_FBW7_1
0.5825
p.A245V
DO219022
BLCA
ICGC
PATPGAS
DEG_SCF_FBW7_1
0.5825
p.T236I
TCGA-EB-A5UM
SKCM
TCGA
PATPGAS
DEG_SCF_FBW7_1
0.2222
p.T236I
DO47282
SKCM
ICGC
PATPGAS
DEG_SCF_FBW7_1
0.2222
p.H253Y
TCGA-EE-A29E
SKCM
TCGA
PATPGAS
DEG_SCF_FBW7_1
0.1389
p.H253Y
DO37831
SKCM
ICGC
PATPGAS
DEG_SCF_FBW7_1
0.1389
p.P232L
TCGA-K4-A5RH
BLCA
TCGA
PATPGAS
DEG_SCF_FBW7_1
0.1111
p.P232L
DO219028
BLCA
ICGC
PATPGAS
DEG_SCF_FBW7_1
0.1111
p.V254M
TCGA-NJ-A4YQ
LUAD
TCGA
PATPGAS
DEG_SCF_FBW7_1
0.1111
p.V254M
DO218944
LUAD
ICGC
PATPGAS
DEG_SCF_FBW7_1
0.1111
p.R249S
DO234314
ESAD
ICGC
PATPGAS
DEG_SCF_FBW7_1
0.25
p.H253R
DO50797
LICA
ICGC
PATPGAS
DEG_SCF_FBW7_1
0.1389
p.S235I
DO231902
LINC
ICGC
PATPGAS
DEG_SCF_FBW7_1
0.1944
p.D237N
SIDM01175
Other Sarcomas
GDSC
PATPGAS
DEG_SCF_FBW7_1
0.25
p.D237N
SIDM00286
Neuroblastoma
GDSC
PATPGAS
DEG_SCF_FBW7_1
0.25
p.D237N
SIDM01561
Melanoma
GDSC
PATPGAS
DEG_SCF_FBW7_1
0.25
p.D237N
ACH-000136
Neuroblastoma
CCLE
PATPGAS
DEG_SCF_FBW7_1
0.25
p.D237N
ACH-000799
Skin Cancer
CCLE
PATPGAS
DEG_SCF_FBW7_1
0.25
p.D237N
ACH-002309
Sarcoma
CCLE
PATPGAS
DEG_SCF_FBW7_1
0.25
Drug responses associated with MYF5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PATPGAS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P13349
Myogenic factor 5
DEG_SCF_FBW7_1
240:246
PATPGAS
FBXW7
0.8809
More...
Q9H3U1
Protein unc-45 homolog A
DEG_SCF_FBW7_1
13:19
PATPGAS
FBXW7
0.872
More...