DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PATPVPS
Uniprot ID:
Q9Y2D9
Source protein:
Zinc finger protein 652
Source gene:
ZNF652
Class:
DEG_SCF_FBW7_1
Location:
512:518
E3 ligase:
FBXW7
DEGRON score:
0.6745
ASA_SCORE:
83.2429
COIL:
0.781
CONS_SCORE:
0.6546
DSS_SCORE:
0.4672
HELIX:
0.0287
FCONS_SCORE:
0.855
RIG_SCORE:
0.6753
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V519A
TCGA-E2-A15M
BRCA
TCGA
PATPVPS
DEG_SCF_FBW7_1
0.3056
p.V519A
DO2026
BRCA
ICGC
PATPVPS
DEG_SCF_FBW7_1
0.3056
p.P526S
TCGA-EE-A2GT
SKCM
TCGA
PATPVPS
DEG_SCF_FBW7_1
0.1111
p.P526S
DO37946
SKCM
ICGC
PATPVPS
DEG_SCF_FBW7_1
0.1111
p.P526T
TCGA-EE-A2MM
SKCM
TCGA
PATPVPS
DEG_SCF_FBW7_1
0.1111
p.P526T
DO37770
SKCM
ICGC
PATPVPS
DEG_SCF_FBW7_1
0.1111
p.P517S
TCGA-FR-A8YC
SKCM
TCGA
PATPVPS
DEG_SCF_FBW7_1
0.5641
p.P517S
DO50301
SKCM
ICGC
PATPVPS
DEG_SCF_FBW7_1
0.5641
p.P517T
DO225215
BRCA
ICGC
PATPVPS
DEG_SCF_FBW7_1
0.5919
p.P517T
DO227836
BRCA
ICGC
PATPVPS
DEG_SCF_FBW7_1
0.5919
p.N521K
DO229025
LICA
ICGC
PATPVPS
DEG_SCF_FBW7_1
0.25
p.V516F
SIDM01257
Hepatocellular Carcinoma
GDSC
PATPVPS
DEG_SCF_FBW7_1
0.5957
p.V516F
SIDM00062
Hepatocellular Carcinoma
GDSC
PATPVPS
DEG_SCF_FBW7_1
0.5957
p.V516F
ACH-000671
Liver Cancer
CCLE
PATPVPS
DEG_SCF_FBW7_1
0.5957
p.V516F
ACH-002395
Liver Cancer
CCLE
PATPVPS
DEG_SCF_FBW7_1
0.5957
p.V516F
HUH-6-clone5
liver
COSMIC
PATPVPS
DEG_SCF_FBW7_1
0.5957
p.T527I
SIDM00720
Mesothelioma
GDSC
PATPVPS
DEG_SCF_FBW7_1
0.0833
p.T527I
SIDM00760
Small Cell Lung Carcinoma
GDSC
PATPVPS
DEG_SCF_FBW7_1
0.0833
Drug responses associated with ZNF652 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PATPVPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q92993
Histone acetyltransferase KAT5
DEG_SCF_FBW7_1
156:162
PATPVPS
FBXW7
0.9978
More...
Q9Y2D9
Zinc finger protein 652
DEG_SCF_FBW7_1
512:518
PATPVPS
FBXW7
0.6745
More...