DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PIR
Uniprot ID:
O95298
Source protein:
NADH dehydrogenase [ubiquinone] 1 subunit C2
Source gene:
NDUFC2
Class:
DEG_APCC_TPR_1
Location:
117:119
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8991
ASA_SCORE:
102.2667
COIL:
0.816
CONS_SCORE:
0.873
DSS_SCORE:
0.805
HELIX:
0.0213
FCONS_SCORE:
1.268
RIG_SCORE:
0.8029
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R119L
TCGA-55-8089
LUAD
TCGA
PIR
DEG_APCC_TPR_1
0.8428
p.R119C
TCGA-AJ-A3OJ
UCEC
TCGA
PIR
DEG_APCC_TPR_1
0.8301
p.H116Y
TCGA-W3-A825
SKCM
TCGA
PIR
DEG_APCC_TPR_1
0.3056
p.F115S
SIDM00779
Colorectal Carcinoma
GDSC
PIR
DEG_APCC_TPR_1
0.2778
p.H116L
ACH-001791
Liposarcoma
CCLE
PIR
DEG_APCC_TPR_1
0.3056
Drug responses associated with NDUFC2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PIR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95298
NADH dehydrogenase [ubiquinone] 1 subunit C2
DEG_APCC_TPR_1
117:119
PIR
APC,CDC20,FZR1
0.8991
More...
Q96N11
Integrator complex subunit 15
DEG_APCC_TPR_1
447:449
PIR
APC,CDC20,FZR1
0.9974
More...