DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PRTPFTT
Uniprot ID:
P28360
Source protein:
Homeobox protein MSX-1
Source gene:
MSX1
Class:
DEG_SCF_FBW7_1
Location:
175:181
E3 ligase:
FBXW7
DEGRON score:
0.9687
ASA_SCORE:
57.1571
COIL:
0.7909
CONS_SCORE:
0.8227
DSS_SCORE:
0.5806
HELIX:
0.1606
FCONS_SCORE:
0.9417
RIG_SCORE:
0.7506
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R173C
TCGA-06-5416
GBM
TCGA
PRTPFTT
DEG_SCF_FBW7_1
0.2778
p.R173C
TCGA-L5-A4OI
ESCA
TCGA
PRTPFTT
DEG_SCF_FBW7_1
0.2778
p.R173C
DO10880
GBM
ICGC
PRTPFTT
DEG_SCF_FBW7_1
0.2778
p.F179C
TCGA-13-1494
OV
TCGA
PRTPFTT
DEG_SCF_FBW7_1
0.5996
p.F179C
DO32698
OV
ICGC
PRTPFTT
DEG_SCF_FBW7_1
0.5996
p.T177A
TCGA-63-A5MM
LUSC
TCGA
PRTPFTT
DEG_SCF_FBW7_1
0.7139
p.T177A
DO219153
LUSC
ICGC
PRTPFTT
DEG_SCF_FBW7_1
0.7139
p.R176Q
TCGA-A7-A2KD
BRCA
TCGA
PRTPFTT
DEG_SCF_FBW7_1
0.6218
p.R176Q
DO3083
BRCA
ICGC
PRTPFTT
DEG_SCF_FBW7_1
0.6218
p.R189H
TCGA-IR-A3LI
CESC
TCGA
PRTPFTT
DEG_SCF_FBW7_1
0.1111
p.R189H
DO44400
CESC
ICGC
PRTPFTT
DEG_SCF_FBW7_1
0.1111
p.R173H
TCGA-VQ-A91D
STAD
TCGA
PRTPFTT
DEG_SCF_FBW7_1
0.2778
p.R173H
DO233867
GACA
ICGC
PRTPFTT
DEG_SCF_FBW7_1
0.2778
p.R173H
DO51783
STAD
ICGC
PRTPFTT
DEG_SCF_FBW7_1
0.2778
p.T171M
DO23521
LIRI
ICGC
PRTPFTT
DEG_SCF_FBW7_1
0.2222
p.R176W
DO33312
PACA
ICGC
PRTPFTT
DEG_SCF_FBW7_1
0.7523
p.K170R
SIDM00216
Colorectal Carcinoma
GDSC
PRTPFTT
DEG_SCF_FBW7_1
0.3056
p.K170R
ACH-000989
Colon/Colorectal Cancer
CCLE
PRTPFTT
DEG_SCF_FBW7_1
0.3056
p.K170R
SNU-175
large_intestine
COSMIC
PRTPFTT
DEG_SCF_FBW7_1
0.3056
p.T180I
SIDM00233
T-Lymphoblastic Leukemia
GDSC
PRTPFTT
DEG_SCF_FBW7_1
0.7078
p.T180I
ACH-002058
Leukemia
CCLE
PRTPFTT
DEG_SCF_FBW7_1
0.7078
p.T180I
ATN-1
haematopoietic_and_lymphoid_tissue
COSMIC
PRTPFTT
DEG_SCF_FBW7_1
0.7078
p.P178S
SIDM00780
Colorectal Carcinoma
GDSC
PRTPFTT
DEG_SCF_FBW7_1
0.6752
p.P178S
ACH-000967
Colon/Colorectal Cancer
CCLE
PRTPFTT
DEG_SCF_FBW7_1
0.6752
p.R167P
ACH-000900
Lung Cancer
CCLE
PRTPFTT
DEG_SCF_FBW7_1
0.1111
p.R167P
NCI-H23
lung
COSMIC
PRTPFTT
DEG_SCF_FBW7_1
0.1111
p.A182V
ACH-001278
Ovarian Cancer
CCLE
PRTPFTT
DEG_SCF_FBW7_1
0.3056
Drug responses associated with MSX1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRTPFTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P28360
Homeobox protein MSX-1
DEG_SCF_FBW7_1
175:181
PRTPFTT
FBXW7
0.9687
More...
P35548
Homeobox protein MSX-2
DEG_SCF_FBW7_1
145:151
PRTPFTT
FBXW7
0.9986
More...