DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PRTPFTT
Uniprot ID:
P35548
Source protein:
Homeobox protein MSX-2
Source gene:
MSX2
Class:
DEG_SCF_FBW7_1
Location:
145:151
E3 ligase:
FBXW7
DEGRON score:
0.9986
ASA_SCORE:
61.0857
COIL:
0.7947
CONS_SCORE:
0.9052
DSS_SCORE:
0.6037
HELIX:
0.1593
FCONS_SCORE:
1.0831
RIG_SCORE:
0.7398
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R137K
TCGA-21-1079
LUSC
TCGA
PRTPFTT
DEG_SCF_FBW7_1
0.1111
p.R137K
DO26846
LUSC
ICGC
PRTPFTT
DEG_SCF_FBW7_1
0.1111
p.R137M
TCGA-46-6026
LUSC
TCGA
PRTPFTT
DEG_SCF_FBW7_1
0.1111
p.R137M
DO26740
LUSC
ICGC
PRTPFTT
DEG_SCF_FBW7_1
0.1111
p.R146H
TCGA-AA-A022
COAD
TCGA
PRTPFTT
DEG_SCF_FBW7_1
0.7133
p.R146H
TCGA-F4-6703
COAD
TCGA
PRTPFTT
DEG_SCF_FBW7_1
0.7133
p.R146H
TCGA-G4-6588
COAD
TCGA
PRTPFTT
DEG_SCF_FBW7_1
0.7133
p.R146H
DO10647
COAD
ICGC
PRTPFTT
DEG_SCF_FBW7_1
0.7133
p.R146H
DO10140
COAD
ICGC
PRTPFTT
DEG_SCF_FBW7_1
0.7133
p.R146H
DO9908
COAD
ICGC
PRTPFTT
DEG_SCF_FBW7_1
0.7133
p.R146H
DO228138
PBCA
ICGC
PRTPFTT
DEG_SCF_FBW7_1
0.7133
p.A156T
TCGA-AJ-A3EL
UCEC
TCGA
PRTPFTT
DEG_SCF_FBW7_1
0.1944
p.A156T
DO41542
UCEC
ICGC
PRTPFTT
DEG_SCF_FBW7_1
0.1944
p.F149L
TCGA-BG-A222
UCEC
TCGA
PRTPFTT
DEG_SCF_FBW7_1
0.587
p.F149L
DO42977
UCEC
ICGC
PRTPFTT
DEG_SCF_FBW7_1
0.587
p.P145L
TCGA-CM-5861
COAD
TCGA
PRTPFTT
DEG_SCF_FBW7_1
0.6471
p.P145L
DO7918
COAD
ICGC
PRTPFTT
DEG_SCF_FBW7_1
0.6471
p.E158K
TCGA-FG-6690
LGG
TCGA
PRTPFTT
DEG_SCF_FBW7_1
0.1389
p.E158K
DO22141
LGG
ICGC
PRTPFTT
DEG_SCF_FBW7_1
0.1389
p.T147M
TCGA-J4-AATZ
PRAD
TCGA
PRTPFTT
DEG_SCF_FBW7_1
0.7423
p.T147M
DO219261
PRAD
ICGC
PRTPFTT
DEG_SCF_FBW7_1
0.7423
p.K160N
DO229028
LICA
ICGC
PRTPFTT
DEG_SCF_FBW7_1
0.1944
p.R146S
SIDM00014
Colorectal Carcinoma
GDSC
PRTPFTT
DEG_SCF_FBW7_1
0.6316
p.R146S
LIM1215
large_intestine
COSMIC
PRTPFTT
DEG_SCF_FBW7_1
0.6316
Drug responses associated with MSX2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRTPFTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P28360
Homeobox protein MSX-1
DEG_SCF_FBW7_1
175:181
PRTPFTT
FBXW7
0.9687
More...
P35548
Homeobox protein MSX-2
DEG_SCF_FBW7_1
145:151
PRTPFTT
FBXW7
0.9986
More...