DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPAPE
Uniprot ID:
Q5KU26
Source protein:
Collectin-12
Source gene:
COLEC12
Class:
DEG_SCF_FBW7_2
Location:
598:603
E3 ligase:
FBXW7
DEGRON score:
0.9614
ASA_SCORE:
72.9333
COIL:
0.8895
CONS_SCORE:
0.2922
DSS_SCORE:
0.6343
HELIX:
0.0592
FCONS_SCORE:
0.6811
RIG_SCORE:
0.6248
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P608T
TCGA-94-A5I4
LUSC
TCGA
PTPAPE
DEG_SCF_FBW7_2
0.1944
p.P608T
DO219175
LUSC
ICGC
PTPAPE
DEG_SCF_FBW7_2
0.1944
p.D604G
TCGA-A5-A7WK
UCEC
TCGA
PTPAPE
DEG_SCF_FBW7_2
0.3056
p.D604G
DO223279
UCEC
ICGC
PTPAPE
DEG_SCF_FBW7_2
0.3056
p.P591L
TCGA-AA-3524
COAD
TCGA
PTPAPE
DEG_SCF_FBW7_2
0.1389
p.P591L
DO8011
COAD
ICGC
PTPAPE
DEG_SCF_FBW7_2
0.1389
p.P600Q
TCGA-DA-A1I5
SKCM
TCGA
PTPAPE
DEG_SCF_FBW7_2
0.7035
p.P600Q
DO37447
SKCM
ICGC
PTPAPE
DEG_SCF_FBW7_2
0.7035
p.P600Q
SIDM01154
T-Lymphoblastic Leukemia
GDSC
PTPAPE
DEG_SCF_FBW7_2
0.7035
p.P600Q
SUP-T1
haematopoietic_and_lymphoid_tissue
COSMIC
PTPAPE
DEG_SCF_FBW7_2
0.7035
p.G606S
DO229010
COCA
ICGC
PTPAPE
DEG_SCF_FBW7_2
0.25
p.G606S
DO229013
COCA
ICGC
PTPAPE
DEG_SCF_FBW7_2
0.25
p.G606S
DO229016
COCA
ICGC
PTPAPE
DEG_SCF_FBW7_2
0.25
p.G606S
DO234204
ESAD
ICGC
PTPAPE
DEG_SCF_FBW7_2
0.25
p.G606S
DO234285
ESAD
ICGC
PTPAPE
DEG_SCF_FBW7_2
0.25
p.G606S
DO230659
LAML
ICGC
PTPAPE
DEG_SCF_FBW7_2
0.25
p.G606S
DO228941
LICA
ICGC
PTPAPE
DEG_SCF_FBW7_2
0.25
p.G606S
DO229047
LICA
ICGC
PTPAPE
DEG_SCF_FBW7_2
0.25
p.G606S
DO230990
LUSC
ICGC
PTPAPE
DEG_SCF_FBW7_2
0.25
p.N605S
DO228971
LICA
ICGC
PTPAPE
DEG_SCF_FBW7_2
0.2778
p.P598T
DO229009
LICA
ICGC
PTPAPE
DEG_SCF_FBW7_2
0.7031
p.E603K
DO232761
PBCA
ICGC
PTPAPE
DEG_SCF_FBW7_2
0.7022
p.D604H
SIDM00969
Ovarian Carcinoma
GDSC
PTPAPE
DEG_SCF_FBW7_2
0.3056
p.P600L
SIDM00839
Colorectal Carcinoma
GDSC
PTPAPE
DEG_SCF_FBW7_2
0.7582
p.P602L
SIDM01770
Gastric Carcinoma
GDSC
PTPAPE
DEG_SCF_FBW7_2
0.6471
p.P591S
ACH-001554
Eye Cancer
CCLE
PTPAPE
DEG_SCF_FBW7_2
0.1389
Drug responses associated with COLEC12 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPAPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P46379
Large proline-rich protein BAG6
DEG_SCF_FBW7_2
259:264
PTPAPE
FBXW7
0.8992
More...
Q5KU26
Collectin-12
DEG_SCF_FBW7_2
598:603
PTPAPE
FBXW7
0.9614
More...