DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPKSE
Uniprot ID:
Q8WXF7
Source protein:
Atlastin-1
Source gene:
ATL1
Class:
DEG_SCF_FBW7_2
Location:
543:548
E3 ligase:
FBXW7
DEGRON score:
0.5876
ASA_SCORE:
107.05
COIL:
0.9132
CONS_SCORE:
0.2286
DSS_SCORE:
0.6084
HELIX:
0.0622
FCONS_SCORE:
0.76
RIG_SCORE:
0.6289
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H536Q
TCGA-2W-A8YY
CESC
TCGA
PTPKSE
DEG_SCF_FBW7_2
0.1389
p.H536Q
DO223732
CESC
ICGC
PTPKSE
DEG_SCF_FBW7_2
0.1389
p.K555N
TCGA-AP-A056
UCEC
TCGA
PTPKSE
DEG_SCF_FBW7_2
0.25
p.K555N
TCGA-AZ-4315
COAD
TCGA
PTPKSE
DEG_SCF_FBW7_2
0.25
p.K555N
TCGA-BR-8680
STAD
TCGA
PTPKSE
DEG_SCF_FBW7_2
0.25
p.P543T
TCGA-D3-A3CE
SKCM
TCGA
PTPKSE
DEG_SCF_FBW7_2
0.7031
p.E548G
TCGA-EE-A2MI
SKCM
TCGA
PTPKSE
DEG_SCF_FBW7_2
0.7199
p.Q540E
TCGA-ZF-AA56
BLCA
TCGA
PTPKSE
DEG_SCF_FBW7_2
0.25
p.Q540E
DO219099
BLCA
ICGC
PTPKSE
DEG_SCF_FBW7_2
0.25
p.K550N
DO8842
COAD
ICGC
PTPKSE
DEG_SCF_FBW7_2
0.2778
p.K550N
DO47769
STAD
ICGC
PTPKSE
DEG_SCF_FBW7_2
0.2778
p.K550N
DO43971
UCEC
ICGC
PTPKSE
DEG_SCF_FBW7_2
0.2778
p.S542L
DO227549
COCA
ICGC
PTPKSE
DEG_SCF_FBW7_2
0.3056
p.E543K
DO222843
MELA
ICGC
PTPKSE
DEG_SCF_FBW7_2
0.7022
p.E543G
DO37531
SKCM
ICGC
PTPKSE
DEG_SCF_FBW7_2
0.7199
p.P538T
DO37405
SKCM
ICGC
PTPKSE
DEG_SCF_FBW7_2
0.1944
Drug responses associated with ATL1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPKSE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8WXF7
Atlastin-1
DEG_SCF_FBW7_2
543:548
PTPKSE
FBXW7
0.5876
More...
Q9BXP8
Pappalysin-2
DEG_SCF_FBW7_2
776:781
PTPKSE
FBXW7
0.8972
More...