DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPKSE
Uniprot ID:
Q9BXP8
Source protein:
Pappalysin-2
Source gene:
PAPPA2
Class:
DEG_SCF_FBW7_2
Location:
776:781
E3 ligase:
FBXW7
DEGRON score:
0.8972
ASA_SCORE:
79.3667
COIL:
0.8445
CONS_SCORE:
0.7627
DSS_SCORE:
0.4962
HELIX:
0.1128
FCONS_SCORE:
1.0366
RIG_SCORE:
0.6913
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T789P
TCGA-52-7811
LUSC
TCGA
PTPKSE
DEG_SCF_FBW7_2
0.1111
p.T789P
DO26569
LUSC
ICGC
PTPKSE
DEG_SCF_FBW7_2
0.1111
p.R784Q
TCGA-BH-A18U
BRCA
TCGA
PTPKSE
DEG_SCF_FBW7_2
0.25
p.R784Q
TCGA-FB-AAPU
PAAD
TCGA
PTPKSE
DEG_SCF_FBW7_2
0.25
p.R784Q
DO5200
BRCA
ICGC
PTPKSE
DEG_SCF_FBW7_2
0.25
p.R784Q
DO218966
PAAD
ICGC
PTPKSE
DEG_SCF_FBW7_2
0.25
p.A775T
TCGA-C8-A26V
BRCA
TCGA
PTPKSE
DEG_SCF_FBW7_2
0.3056
p.A775T
DO4287
BRCA
ICGC
PTPKSE
DEG_SCF_FBW7_2
0.3056
p.T767M
TCGA-D3-A51G
SKCM
TCGA
PTPKSE
DEG_SCF_FBW7_2
0.0833
p.T767M
DO227979
COCA
ICGC
PTPKSE
DEG_SCF_FBW7_2
0.0833
p.T767M
DO47700
SKCM
ICGC
PTPKSE
DEG_SCF_FBW7_2
0.0833
p.T767M
SIDM01307
Colorectal Carcinoma
GDSC
PTPKSE
DEG_SCF_FBW7_2
0.0833
p.S780T
TCGA-MN-A4N5
LUAD
TCGA
PTPKSE
DEG_SCF_FBW7_2
0.6005
p.S780T
DO45332
LUAD
ICGC
PTPKSE
DEG_SCF_FBW7_2
0.6005
p.P788R
TCGA-MP-A4SV
LUAD
TCGA
PTPKSE
DEG_SCF_FBW7_2
0.1389
p.P788R
DO45339
LUAD
ICGC
PTPKSE
DEG_SCF_FBW7_2
0.1389
p.E766D
TCGA-R6-A6DQ
ESCA
TCGA
PTPKSE
DEG_SCF_FBW7_2
0.0556
p.T767P
DO225328
BRCA
ICGC
PTPKSE
DEG_SCF_FBW7_2
0.0833
p.C771S
DO222565
COCA
ICGC
PTPKSE
DEG_SCF_FBW7_2
0.1944
p.P778L
DO220880
MELA
ICGC
PTPKSE
DEG_SCF_FBW7_2
0.7582
p.S790I
SIDM01203
Other Solid Cancers
GDSC
PTPKSE
DEG_SCF_FBW7_2
0.0833
p.S790I
ACH-002291
Embryonal Cancer
CCLE
PTPKSE
DEG_SCF_FBW7_2
0.0833
p.S790I
NTERA-2_cl_D1
testis
COSMIC
PTPKSE
DEG_SCF_FBW7_2
0.0833
p.P786Q
ACH-000393
Liver Cancer
CCLE
PTPKSE
DEG_SCF_FBW7_2
0.1944
Drug responses associated with PAPPA2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPKSE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8WXF7
Atlastin-1
DEG_SCF_FBW7_2
543:548
PTPKSE
FBXW7
0.5876
More...
Q9BXP8
Pappalysin-2
DEG_SCF_FBW7_2
776:781
PTPKSE
FBXW7
0.8972
More...