DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPLVS
Uniprot ID:
O60928
Source protein:
Inward rectifier potassium channel 13
Source gene:
KCNJ13
Class:
DEG_SCF_FBW7_1
Location:
326:331
E3 ligase:
FBXW7
DEGRON score:
0.9888
ASA_SCORE:
69.7667
COIL:
0.9317
CONS_SCORE:
0.3736
DSS_SCORE:
0.5286
HELIX:
0.0172
FCONS_SCORE:
0.9921
RIG_SCORE:
0.7455
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P328H
TCGA-DF-A2KU
UCEC
TCGA
PTPLVS
DEG_SCF_FBW7_1
0.7694
p.P328H
DO223286
UCEC
ICGC
PTPLVS
DEG_SCF_FBW7_1
0.7694
p.L329P
TCGA-UB-A7MD
LIHC
TCGA
PTPLVS
DEG_SCF_FBW7_1
0.6471
p.L329P
DO52320
LIHC
ICGC
PTPLVS
DEG_SCF_FBW7_1
0.6471
p.L339V
SIDM01117
Small Cell Lung Carcinoma
GDSC
PTPLVS
DEG_SCF_FBW7_1
0.1111
p.L339V
ACH-002176
Lung Cancer
CCLE
PTPLVS
DEG_SCF_FBW7_1
0.1111
p.L339V
NCI-H748
lung
COSMIC
PTPLVS
DEG_SCF_FBW7_1
0.1111
p.P328R
SIDM00711
Squamous Cell Lung Carcinoma
GDSC
PTPLVS
DEG_SCF_FBW7_1
0.7512
p.P328R
ACH-000727
Lung Cancer
CCLE
PTPLVS
DEG_SCF_FBW7_1
0.7512
p.P328R
NCI-H2066
lung
COSMIC
PTPLVS
DEG_SCF_FBW7_1
0.7512
Drug responses associated with KCNJ13 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPLVS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60928
Inward rectifier potassium channel 13
DEG_SCF_FBW7_1
326:331
PTPLVS
FBXW7
0.9888
More...
Q2KHR3
Glutamine and serine-rich protein 1
DEG_SCF_FBW7_1
1200:1205
PTPLVS
FBXW7
0.998
More...