DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
RRRILQPML
Uniprot ID:
P55347
Source protein:
Homeobox protein PKNOX1
Source gene:
PKNOX1
Class:
DEG_APCC_DBOX_1
Location:
314:322
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7494
ASA_SCORE:
96.8
COIL:
0.562
CONS_SCORE:
0.6706
DSS_SCORE:
0.3245
HELIX:
0.4011
FCONS_SCORE:
1.1542
RIG_SCORE:
0.8141
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.I311F
TCGA-B0-5096
KIRC
TCGA
RRRILQPML
DEG_APCC_DBOX_1
0.25
p.I311F
DO19218
KIRC
ICGC
RRRILQPML
DEG_APCC_DBOX_1
0.25
p.W309G
TCGA-DU-6392
LGG
TCGA
RRRILQPML
DEG_APCC_DBOX_1
0.1944
p.R316Q
TCGA-EY-A1GI
UCEC
TCGA
RRRILQPML
DEG_APCC_DBOX_1
0.6218
p.R316Q
DO222762
COCA
ICGC
RRRILQPML
DEG_APCC_DBOX_1
0.6218
p.R316Q
DO41211
UCEC
ICGC
RRRILQPML
DEG_APCC_DBOX_1
0.6218
p.N312D
DO233908
GACA
ICGC
RRRILQPML
DEG_APCC_DBOX_1
0.2778
p.M321I
DO228952
LICA
ICGC
RRRILQPML
DEG_APCC_DBOX_1
0.6507
p.A313S
DO228976
LICA
ICGC
RRRILQPML
DEG_APCC_DBOX_1
0.3056
p.F310L
SIDM00193
Colorectal Carcinoma
GDSC
RRRILQPML
DEG_APCC_DBOX_1
0.2222
p.F310L
ACH-000991
Colon/Colorectal Cancer
CCLE
RRRILQPML
DEG_APCC_DBOX_1
0.2222
p.F310L
SNU-81
large_intestine
COSMIC
RRRILQPML
DEG_APCC_DBOX_1
0.2222
p.M321V
ACH-000993
Endometrial/Uterine Cancer
CCLE
RRRILQPML
DEG_APCC_DBOX_1
0.6097
p.S324L
ACH-001148
Lymphoma
CCLE
RRRILQPML
DEG_APCC_DBOX_1
0.7222
Drug responses associated with PKNOX1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RRRILQPML
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P55347
Homeobox protein PKNOX1
DEG_APCC_DBOX_1
314:322
RRRILQPML
APC,CDC20,FZR1
0.7494
More...
Q96KN3
Homeobox protein PKNOX2
DEG_APCC_DBOX_1
343:351
RRRILQPML
APC,CDC20,FZR1
0.5766
More...