DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
RRRILQPML
Uniprot ID:
Q96KN3
Source protein:
Homeobox protein PKNOX2
Source gene:
PKNOX2
Class:
DEG_APCC_DBOX_1
Location:
343:351
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5766
ASA_SCORE:
88.3222
COIL:
0.5063
CONS_SCORE:
0.5495
DSS_SCORE:
0.3642
HELIX:
0.4588
FCONS_SCORE:
1.2357
RIG_SCORE:
0.8057
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A359D
TCGA-44-2656
LUAD
TCGA
RRRILQPML
DEG_APCC_DBOX_1
0.1111
p.A359D
DO26052
LUAD
ICGC
RRRILQPML
DEG_APCC_DBOX_1
0.1111
p.F339Y
TCGA-55-8507
LUAD
TCGA
RRRILQPML
DEG_APCC_DBOX_1
0.2222
p.F339Y
DO45412
LUAD
ICGC
RRRILQPML
DEG_APCC_DBOX_1
0.2222
p.D357Y
TCGA-55-A48X
LUAD
TCGA
RRRILQPML
DEG_APCC_DBOX_1
0.1667
p.D357Y
DO24048
LUAD
ICGC
RRRILQPML
DEG_APCC_DBOX_1
0.1667
p.M350T
TCGA-AA-3510
COAD
TCGA
RRRILQPML
DEG_APCC_DBOX_1
0.7423
p.M350T
DO7783
COAD
ICGC
RRRILQPML
DEG_APCC_DBOX_1
0.7423
p.L333M
TCGA-FS-A1ZP
SKCM
TCGA
RRRILQPML
DEG_APCC_DBOX_1
0.0556
p.L333M
DO37703
SKCM
ICGC
RRRILQPML
DEG_APCC_DBOX_1
0.0556
p.D352H
TCGA-LD-A74U
BRCA
TCGA
RRRILQPML
DEG_APCC_DBOX_1
0.3056
p.D352H
DO49025
BRCA
ICGC
RRRILQPML
DEG_APCC_DBOX_1
0.3056
p.P349L
DO220885
MELA
ICGC
RRRILQPML
DEG_APCC_DBOX_1
0.6471
p.R345C
SIDM02061
Esophageal Carcinoma
GDSC
RRRILQPML
DEG_APCC_DBOX_1
0.719
p.R343Q
SIDM01775
B-Cell Non-Hodgkin's Lymphoma
GDSC
RRRILQPML
DEG_APCC_DBOX_1
0.6218
p.R343Q
ACH-000140
Lymphoma
CCLE
RRRILQPML
DEG_APCC_DBOX_1
0.6218
p.P349R
ACH-000966
Ovarian Cancer
CCLE
RRRILQPML
DEG_APCC_DBOX_1
0.6401
Drug responses associated with PKNOX2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RRRILQPML
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P55347
Homeobox protein PKNOX1
DEG_APCC_DBOX_1
314:322
RRRILQPML
APC,CDC20,FZR1
0.7494
More...
Q96KN3
Homeobox protein PKNOX2
DEG_APCC_DBOX_1
343:351
RRRILQPML
APC,CDC20,FZR1
0.5766
More...