DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SDESGE
Uniprot ID:
Q6PKG0
Source protein:
La-related protein 1
Source gene:
LARP1
Class:
DEG_Kelch_Keap1_1
Location:
225:230
E3 ligase:
KEAP1
DEGRON score:
0.9811
ASA_SCORE:
84.8333
COIL:
0.8718
CONS_SCORE:
0.3176
DSS_SCORE:
0.7194
HELIX:
0.1045
FCONS_SCORE:
1.0426
RIG_SCORE:
0.5304
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V222M
TCGA-E6-A1LX
UCEC
TCGA
SDESGE
DEG_Kelch_Keap1_1
0.3611
p.V222M
DO41020
UCEC
ICGC
SDESGE
DEG_Kelch_Keap1_1
0.3611
p.V222M
SIDM00487
Colorectal Carcinoma
GDSC
SDESGE
DEG_Kelch_Keap1_1
0.3611
p.V220M
TCGA-VQ-A8P2
STAD
TCGA
SDESGE
DEG_Kelch_Keap1_1
0.6389
p.V220M
DO51761
STAD
ICGC
SDESGE
DEG_Kelch_Keap1_1
0.6389
p.S216C
DO222603
BTCA
ICGC
SDESGE
DEG_Kelch_Keap1_1
0.0833
p.I233T
SIDM00845
Burkitt's Lymphoma
GDSC
SDESGE
DEG_Kelch_Keap1_1
0.25
p.P235A
SIDM00845
Burkitt's Lymphoma
GDSC
SDESGE
DEG_Kelch_Keap1_1
0.1944
p.P235L
SIDM00845
Burkitt's Lymphoma
GDSC
SDESGE
DEG_Kelch_Keap1_1
0.1944
p.A223G
SIDM01113
Other Sarcomas
GDSC
SDESGE
DEG_Kelch_Keap1_1
0.7222
p.V222L
SIDM00703
Non-Small Cell Lung Carcinoma
GDSC
SDESGE
DEG_Kelch_Keap1_1
0.3611
p.V222L
ACH-000929
Lung Cancer
CCLE
SDESGE
DEG_Kelch_Keap1_1
0.3611
p.V222L
NCI-H2110
lung
COSMIC
SDESGE
DEG_Kelch_Keap1_1
0.3611
p.A217V
SIDM00727
Non-Small Cell Lung Carcinoma
GDSC
SDESGE
DEG_Kelch_Keap1_1
0.5556
p.A217V
ACH-000951
Lung Cancer
CCLE
SDESGE
DEG_Kelch_Keap1_1
0.5556
p.A217V
NCI-H2342
lung
COSMIC
SDESGE
DEG_Kelch_Keap1_1
0.5556
p.T226P
LS-513
large_intestine
COSMIC
SDESGE
DEG_Kelch_Keap1_1
0.7031
Drug responses associated with LARP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SDESGE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6PKG0
La-related protein 1
DEG_Kelch_Keap1_1
225:230
SDESGE
KEAP1
0.9811
More...
Q7Z3C6
Autophagy-related protein 9A
DEG_Kelch_Keap1_1
735:740
SDESGE
KEAP1
0.9653
More...