DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SHTDIKVPDF
Uniprot ID:
P47985
Source protein:
Cytochrome b-c1 complex subunit Rieske, mitochondrial
Source gene:
UQCRFS1
Class:
DEG_COP1_1
Location:
79:88
E3 ligase:
COP1
DEGRON score:
0.9829
ASA_SCORE:
72.01
COIL:
0.7602
CONS_SCORE:
0.372
DSS_SCORE:
0.1983
HELIX:
0.1026
FCONS_SCORE:
1.2054
RIG_SCORE:
0.8218
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R92H
TCGA-56-8082
LUSC
TCGA
SHTDIKVPDF
DEG_COP1_1
0.2222
p.R92H
DO225346
BRCA
ICGC
SHTDIKVPDF
DEG_COP1_1
0.2222
p.R92H
DO223722
LUSC
ICGC
SHTDIKVPDF
DEG_COP1_1
0.2222
p.R92H
SIDM00500
Colorectal Carcinoma
GDSC
SHTDIKVPDF
DEG_COP1_1
0.2222
p.I83T
TCGA-AJ-A5DW
UCEC
TCGA
SHTDIKVPDF
DEG_COP1_1
0.5966
p.I83T
DO50075
UCEC
ICGC
SHTDIKVPDF
DEG_COP1_1
0.5966
p.D82Y
TCGA-AP-A1DV
UCEC
TCGA
SHTDIKVPDF
DEG_COP1_1
0.6214
p.D82Y
DO43186
UCEC
ICGC
SHTDIKVPDF
DEG_COP1_1
0.6214
p.P86S
TCGA-D9-A4Z3
SKCM
TCGA
SHTDIKVPDF
DEG_COP1_1
0.6752
p.P86S
DO47555
SKCM
ICGC
SHTDIKVPDF
DEG_COP1_1
0.6752
p.S75F
TCGA-DA-A1IC
SKCM
TCGA
SHTDIKVPDF
DEG_COP1_1
0.2222
p.S75F
DO37430
SKCM
ICGC
SHTDIKVPDF
DEG_COP1_1
0.2222
p.R93H
TCGA-SW-A7EA
STAD
TCGA
SHTDIKVPDF
DEG_COP1_1
0.1944
p.R93H
DO233888
GACA
ICGC
SHTDIKVPDF
DEG_COP1_1
0.1944
p.R93H
DO51749
STAD
ICGC
SHTDIKVPDF
DEG_COP1_1
0.1944
p.R93H
SIDM00216
Colorectal Carcinoma
GDSC
SHTDIKVPDF
DEG_COP1_1
0.1944
p.R93H
SIDM00602
Gastric Carcinoma
GDSC
SHTDIKVPDF
DEG_COP1_1
0.1944
p.R93H
ACH-000919
Gastric Cancer
CCLE
SHTDIKVPDF
DEG_COP1_1
0.1944
p.R93H
ACH-000989
Colon/Colorectal Cancer
CCLE
SHTDIKVPDF
DEG_COP1_1
0.1944
p.R93H
SNU-175
large_intestine
COSMIC
SHTDIKVPDF
DEG_COP1_1
0.1944
p.R93H
IM-95
stomach
COSMIC
SHTDIKVPDF
DEG_COP1_1
0.1944
p.S89C
TCGA-UY-A9PB
BLCA
TCGA
SHTDIKVPDF
DEG_COP1_1
0.3056
p.S89C
DO219041
BLCA
ICGC
SHTDIKVPDF
DEG_COP1_1
0.3056
p.I83V
DO228488
BRCA
ICGC
SHTDIKVPDF
DEG_COP1_1
0.5965
p.R92C
DO230347
COCA
ICGC
SHTDIKVPDF
DEG_COP1_1
0.2222
p.R92C
SIDM00177
Melanoma
GDSC
SHTDIKVPDF
DEG_COP1_1
0.2222
Drug responses associated with UQCRFS1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SHTDIKVPDF
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P47985
Cytochrome b-c1 complex subunit Rieske, mitochondrial
DEG_COP1_1
79:88
SHTDIKVPDF
COP1
0.9829
More...
P0C7P4
Putative cytochrome b-c1 complex subunit Rieske-like protein 1
DEG_COP1_1
88:97
SHTDIKVPDF
COP1
0.9829
More...