DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
SSSLNHVPDL
Uniprot ID:
P57052
Source protein:
Splicing regulator RBM11
Source gene:
RBM11
Class:
DEG_COP1_1
Location:
171:180
E3 ligase:
COP1
DEGRON score:
0.9833
ASA_SCORE:
68.97
COIL:
0.9151
CONS_SCORE:
0.3949
DSS_SCORE:
0.459
HELIX:
0.0578
FCONS_SCORE:
1.049
RIG_SCORE:
0.6632
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H176R
TCGA-B0-5098
KIRC
TCGA
SSSLNHVPDL
DEG_COP1_1
0.7133
p.H176R
DO18938
KIRC
ICGC
SSSLNHVPDL
DEG_COP1_1
0.7133
p.D179E
TCGA-EB-A6R0
SKCM
TCGA
SSSLNHVPDL
DEG_COP1_1
0.5647
p.D179E
DO48646
SKCM
ICGC
SSSLNHVPDL
DEG_COP1_1
0.5647
p.L180F
TCGA-EB-A6R0
SKCM
TCGA
SSSLNHVPDL
DEG_COP1_1
0.587
p.L180F
DO222662
MELA
ICGC
SSSLNHVPDL
DEG_COP1_1
0.587
p.L180F
DO48646
SKCM
ICGC
SSSLNHVPDL
DEG_COP1_1
0.587
p.G183R
TCGA-EE-A29S
SKCM
TCGA
SSSLNHVPDL
DEG_COP1_1
0.25
p.G183R
DO37936
SKCM
ICGC
SSSLNHVPDL
DEG_COP1_1
0.25
p.D179Y
TCGA-F9-A4JJ
KIRP
TCGA
SSSLNHVPDL
DEG_COP1_1
0.7325
p.D179Y
DO48472
KIRP
ICGC
SSSLNHVPDL
DEG_COP1_1
0.7325
p.S173L
TCGA-FW-A3R5
SKCM
TCGA
SSSLNHVPDL
DEG_COP1_1
0.7667
p.S173L
DO37406
SKCM
ICGC
SSSLNHVPDL
DEG_COP1_1
0.7667
p.E181Q
DO224566
LUSC
ICGC
SSSLNHVPDL
DEG_COP1_1
0.3056
p.E181Q
DO231007
LUSC
ICGC
SSSLNHVPDL
DEG_COP1_1
0.3056
p.P178L
DO222363
MELA
ICGC
SSSLNHVPDL
DEG_COP1_1
0.7582
p.P165S
SIDM00545
Melanoma
GDSC
SSSLNHVPDL
DEG_COP1_1
0.1667
p.P165S
ACH-000987
Skin Cancer
CCLE
SSSLNHVPDL
DEG_COP1_1
0.1667
p.P165S
Mewo
skin
COSMIC
SSSLNHVPDL
DEG_COP1_1
0.1667
Drug responses associated with RBM11 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SSSLNHVPDL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P57052
Splicing regulator RBM11
DEG_COP1_1
171:180
SSSLNHVPDL
COP1
0.9833
More...
P57052
Splicing regulator RBM11
DEG_COP1_1
213:222
SSSLNHVPDL
COP1
0.9197
More...