DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
SSSLNHVPDL
Uniprot ID:
P57052
Source protein:
Splicing regulator RBM11
Source gene:
RBM11
Class:
DEG_COP1_1
Location:
213:222
E3 ligase:
COP1
DEGRON score:
0.9197
ASA_SCORE:
83.94
COIL:
0.9106
CONS_SCORE:
0.1471
DSS_SCORE:
0.5249
HELIX:
0.0751
FCONS_SCORE:
0.7744
RIG_SCORE:
0.6387
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A204S
TCGA-17-Z033
LUAD
TCGA
SSSLNHVPDL
DEG_COP1_1
0.0833
p.L206F
TCGA-AP-A056
UCEC
TCGA
SSSLNHVPDL
DEG_COP1_1
0.1389
p.L206F
DO43971
UCEC
ICGC
SSSLNHVPDL
DEG_COP1_1
0.1389
p.P207T
TCGA-AX-A05Z
UCEC
TCGA
SSSLNHVPDL
DEG_COP1_1
0.1667
p.P207T
DO40884
UCEC
ICGC
SSSLNHVPDL
DEG_COP1_1
0.1667
p.G225A
TCGA-CV-6945
HNSC
TCGA
SSSLNHVPDL
DEG_COP1_1
0.25
p.G225A
DO15767
HNSC
ICGC
SSSLNHVPDL
DEG_COP1_1
0.25
p.A204T
TCGA-DH-5140
LGG
TCGA
SSSLNHVPDL
DEG_COP1_1
0.0833
p.A204T
DO22701
LGG
ICGC
SSSLNHVPDL
DEG_COP1_1
0.0833
p.P207S
TCGA-DX-AB2E
SARC
TCGA
SSSLNHVPDL
DEG_COP1_1
0.1667
p.P207S
DO220073
SARC
ICGC
SSSLNHVPDL
DEG_COP1_1
0.1667
p.S228L
TCGA-EE-A29H
SKCM
TCGA
SSSLNHVPDL
DEG_COP1_1
0.1667
p.S228L
DO37535
SKCM
ICGC
SSSLNHVPDL
DEG_COP1_1
0.1667
p.S214F
TCGA-EE-A2M5
SKCM
TCGA
SSSLNHVPDL
DEG_COP1_1
0.6871
p.S214F
DO222423
MELA
ICGC
SSSLNHVPDL
DEG_COP1_1
0.6871
p.S214F
DO37425
SKCM
ICGC
SSSLNHVPDL
DEG_COP1_1
0.6871
p.G225R
TCGA-GN-A26C
SKCM
TCGA
SSSLNHVPDL
DEG_COP1_1
0.25
p.G225R
DO37782
SKCM
ICGC
SSSLNHVPDL
DEG_COP1_1
0.25
p.P205L
DO48372
BLCA
ICGC
SSSLNHVPDL
DEG_COP1_1
0.1111
p.P226L
DO229050
LICA
ICGC
SSSLNHVPDL
DEG_COP1_1
0.2222
p.H218L
DO50897
LICA
ICGC
SSSLNHVPDL
DEG_COP1_1
0.6202
p.S211F
DO222868
MELA
ICGC
SSSLNHVPDL
DEG_COP1_1
0.2778
p.L222F
DO222880
MELA
ICGC
SSSLNHVPDL
DEG_COP1_1
0.587
p.S211P
SIDM01588
Endometrial Carcinoma
GDSC
SSSLNHVPDL
DEG_COP1_1
0.2778
p.S211P
ACH-000993
Endometrial/Uterine Cancer
CCLE
SSSLNHVPDL
DEG_COP1_1
0.2778
p.A224T
ACH-000967
Colon/Colorectal Cancer
CCLE
SSSLNHVPDL
DEG_COP1_1
0.2778
p.A224T
ACH-001199
Colon/Colorectal Cancer
CCLE
SSSLNHVPDL
DEG_COP1_1
0.2778
p.A224T
SNU-C2B
large_intestine
COSMIC
SSSLNHVPDL
DEG_COP1_1
0.2778
Drug responses associated with RBM11 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SSSLNHVPDL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P57052
Splicing regulator RBM11
DEG_COP1_1
171:180
SSSLNHVPDL
COP1
0.9833
More...
P57052
Splicing regulator RBM11
DEG_COP1_1
213:222
SSSLNHVPDL
COP1
0.9197
More...