DegronMD: protein-targeted degradation, mutation and drug response to degrons
Home
(current)
Browse
Proteins/Degrons
Mutations
Drug response
Network-rewiring
Drug resistance
Search
Tutorial
Download
Contact
Links
BSML
CPH
CGC
Degron:
VDSTS
Uniprot ID:
P28827
Source protein:
Receptor-type tyrosine-protein phosphatase mu
Source gene:
PTPRM
Class:
DEG_SPOP_SBC_1
Location:
333:337
E3 ligase:
SPOP
DEGRON score:
0.7069
ASA_SCORE:
64.4
COIL:
0.5612
CONS_SCORE:
0.5545
DSS_SCORE:
0.4784
HELIX:
0.0168
FCONS_SCORE:
0.9794
RIG_SCORE:
0.7371
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T336M
TCGA-CQ-5327
HNSC
TCGA
VDSTS
DEG_SPOP_SBC_1
0.7423
p.R347H
DO9530
COAD
ICGC
VDSTS
DEG_SPOP_SBC_1
0.0556
p.G330E
DO222762
COCA
ICGC
VDSTS
DEG_SPOP_SBC_1
0.25
p.G330R
DO234318
ESAD
ICGC
VDSTS
DEG_SPOP_SBC_1
0.25
p.Y343C
DO233271
GACA
ICGC
VDSTS
DEG_SPOP_SBC_1
0.1667
p.E339Q
DO15390
HNSC
ICGC
VDSTS
DEG_SPOP_SBC_1
0.2778
p.P342L
DO45390
LUAD
ICGC
VDSTS
DEG_SPOP_SBC_1
0.1944
p.S347F
DO46327
OV
ICGC
VDSTS
DEG_SPOP_SBC_1
0.0556
p.R337S
DO37847
SKCM
ICGC
VDSTS
DEG_SPOP_SBC_1
0.7427
p.E339K
DO38431
STAD
ICGC
VDSTS
DEG_SPOP_SBC_1
0.2778
p.E339K
SCC90
upper_aerodigestive_tract
COSMIC
VDSTS
DEG_SPOP_SBC_1
0.2778
p.Q333R
DO41331
UCEC
ICGC
VDSTS
DEG_SPOP_SBC_1
0.7329
p.L343I
ACH-000436
Myeloma
CCLE
VDSTS
DEG_SPOP_SBC_1
0.1667
p.S324G
ACH-000990
Endometrial/Uterine Cancer
CCLE
VDSTS
DEG_SPOP_SBC_1
0.0833
Drug responses associated with PTPRM mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VDSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P28827
Receptor-type tyrosine-protein phosphatase mu
DEG_SPOP_SBC_1
333:337
VDSTS
SPOP
0.7069
More...
Q9BYW2
Histone-lysine N-methyltransferase SETD2
DEG_SPOP_SBC_1
1168:1172
VDSTS
SPOP
0.9962
More...