DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VKENA
Uniprot ID:
A6H8Y1
Source protein:
Transcription factor TFIIIB component B'' homolog
Source gene:
BDP1
Class:
DEG_APCC_KENBOX_2
Location:
2076:2080
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9632
ASA_SCORE:
111.3
COIL:
0.72
CONS_SCORE:
0.3904
DSS_SCORE:
0.5187
HELIX:
0.2212
FCONS_SCORE:
1.0612
RIG_SCORE:
0.7177
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R2067S
TCGA-64-1680
LUAD
TCGA
VKENA
DEG_APCC_KENBOX_2
0.0833
p.S2088F
TCGA-A5-A0G2
UCEC
TCGA
VKENA
DEG_APCC_KENBOX_2
0.1111
p.I2087L
TCGA-DU-6392
LGG
TCGA
VKENA
DEG_APCC_KENBOX_2
0.1389
Drug responses associated with BDP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VKENA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A6H8Y1
Transcription factor TFIIIB component B'' homolog
DEG_APCC_KENBOX_2
2076:2080
VKENA
APC,CDC20,FZR1
0.9632
More...
Q9NYB0
Telomeric repeat-binding factor 2-interacting protein 1
DEG_APCC_KENBOX_2
148:152
VKENA
APC,CDC20,FZR1
0.6866
More...