DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRVFEE
Uniprot ID:
P98161
Source protein:
Polycystin-1
Source gene:
PKD1
Class:
LIG_APCC_ABBA_1
Location:
1206:1211
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8618
ASA_SCORE:
55.8833
COIL:
0.1708
CONS_SCORE:
0.3328
DSS_SCORE:
0.1625
HELIX:
0.0097
FCONS_SCORE:
0.8833
RIG_SCORE:
0.9165
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.F1209I
DO47124
RECA
ICGC
VRVFEE
LIG_APCC_ABBA_1
0.7415
p.R1207C
DO233791
GACA
ICGC
VRVFEE
LIG_APCC_ABBA_1
0.719
p.L1212P
ACH-000978
Endometrial/Uterine Cancer
CCLE
VRVFEE
LIG_APCC_ABBA_1
0.3056
p.R1213H
SIDM00780
Colorectal Carcinoma
GDSC
VRVFEE
LIG_APCC_ABBA_1
0.2778
p.R1213H
ACH-000967
Colon/Colorectal Cancer
CCLE
VRVFEE
LIG_APCC_ABBA_1
0.2778
p.S1216G
SIDM00479
Esophageal Carcinoma
GDSC
VRVFEE
LIG_APCC_ABBA_1
0.1944
p.S1216G
ACH-000679
Esophageal Cancer
CCLE
VRVFEE
LIG_APCC_ABBA_1
0.1944
p.G1199S
SIDM00410
Other Blood Cancers
GDSC
VRVFEE
LIG_APCC_ABBA_1
0.1389
p.G1199S
ACH-002317
Leukemia
CCLE
VRVFEE
LIG_APCC_ABBA_1
0.1389
p.G1199S
YT
haematopoietic_and_lymphoid_tissue
COSMIC
VRVFEE
LIG_APCC_ABBA_1
0.1389
p.T1196M
TCGA-A5-A2K3
UCEC
TCGA
VRVFEE
LIG_APCC_ABBA_1
0.0556
p.T1196M
DO43899
UCEC
ICGC
VRVFEE
LIG_APCC_ABBA_1
0.0556
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Drug responses associated with PKD1 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
No data available in table
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All proteins holding degron of VRVFEE
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P98161
Polycystin-1
LIG_APCC_ABBA_1
1206:1211
VRVFEE
APC,CDC20,FZR1
0.8618
More...
Q9C073
Protein FAM117A
LIG_APCC_ABBA_1
347:352
VRVFEE
APC,CDC20,FZR1
0.9837
More...
Showing 1 to 2 of 2 entries
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