DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VRVFEE
Uniprot ID:
Q9C073
Source protein:
Protein FAM117A
Source gene:
FAM117A
Class:
LIG_APCC_ABBA_1
Location:
347:352
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9837
ASA_SCORE:
78.7667
COIL:
0.4382
CONS_SCORE:
0.6474
DSS_SCORE:
0.5032
HELIX:
0.4608
FCONS_SCORE:
0.985
RIG_SCORE:
0.795
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L360V
TCGA-5S-A9Q8
UCEC
TCGA
VRVFEE
LIG_APCC_ABBA_1
0.1111
p.L360V
DO50074
UCEC
ICGC
VRVFEE
LIG_APCC_ABBA_1
0.1111
p.E345D
TCGA-EO-A22X
UCEC
TCGA
VRVFEE
LIG_APCC_ABBA_1
0.2778
p.E345D
DO43907
UCEC
ICGC
VRVFEE
LIG_APCC_ABBA_1
0.2778
p.P341S
TCGA-GN-A26A
SKCM
TCGA
VRVFEE
LIG_APCC_ABBA_1
0.1667
p.P341S
DO37861
SKCM
ICGC
VRVFEE
LIG_APCC_ABBA_1
0.1667
p.T354M
DO48388
BLCA
ICGC
VRVFEE
LIG_APCC_ABBA_1
0.7222
p.S355Y
DO232224
PBCA
ICGC
VRVFEE
LIG_APCC_ABBA_1
0.6944
p.D359E
ACH-001513
Cervical Cancer
CCLE
VRVFEE
LIG_APCC_ABBA_1
0.1389
Drug responses associated with FAM117A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VRVFEE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P98161
Polycystin-1
LIG_APCC_ABBA_1
1206:1211
VRVFEE
APC,CDC20,FZR1
0.8618
More...
Q9C073
Protein FAM117A
LIG_APCC_ABBA_1
347:352
VRVFEE
APC,CDC20,FZR1
0.9837
More...