DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTPKQS
Uniprot ID:
Q16787
Source protein:
Laminin subunit alpha-3
Source gene:
LAMA3
Class:
DEG_SCF_FBW7_1
Location:
3230:3235
E3 ligase:
FBXW7
DEGRON score:
0.5313
ASA_SCORE:
73.7833
COIL:
0.7793
CONS_SCORE:
0.3223
DSS_SCORE:
0.4374
HELIX:
0.0278
FCONS_SCORE:
0.8535
RIG_SCORE:
0.7414
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P3232A
TCGA-BR-8483
STAD
TCGA
VTPKQS
DEG_SCF_FBW7_1
0.7503
p.P3232A
DO47821
STAD
ICGC
VTPKQS
DEG_SCF_FBW7_1
0.7503
p.T3233M
SJSA-1
bone
COSMIC
VTPKQS
DEG_SCF_FBW7_1
0.7423
p.S3229L
TCGA-86-8358
LUAD
TCGA
VTPKQS
DEG_SCF_FBW7_1
0.3056
p.S3229L
DO25471
LUAD
ICGC
VTPKQS
DEG_SCF_FBW7_1
0.3056
p.L3236M
TCGA-FS-A1Z0
SKCM
TCGA
VTPKQS
DEG_SCF_FBW7_1
0.3056
p.L3236M
DO37431
SKCM
ICGC
VTPKQS
DEG_SCF_FBW7_1
0.3056
p.D3220N
TCGA-AA-3685
COAD
TCGA
VTPKQS
DEG_SCF_FBW7_1
0.0556
p.D3220N
DO8047
COAD
ICGC
VTPKQS
DEG_SCF_FBW7_1
0.0556
Showing 1 to 9 of 9 entries
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Drug responses associated with LAMA3 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
No data available in table
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All proteins holding degron of VTPKQS
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q16787
Laminin subunit alpha-3
DEG_SCF_FBW7_1
3230:3235
VTPKQS
FBXW7
0.5313
More...
Q16363
Laminin subunit alpha-4
DEG_SCF_FBW7_1
1720:1725
VTPKQS
FBXW7
0.9278
More...
Showing 1 to 2 of 2 entries
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