DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTPQTS
Uniprot ID:
O15111
Source protein:
Inhibitor of nuclear factor kappa-B kinase subunit alpha
Source gene:
CHUK
Class:
DEG_SCF_FBW7_1
Location:
675:680
E3 ligase:
FBXW7
DEGRON score:
0.7388
ASA_SCORE:
84.65
COIL:
0.8462
CONS_SCORE:
0.2706
DSS_SCORE:
0.477
HELIX:
0.121
FCONS_SCORE:
0.8904
RIG_SCORE:
0.7073
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T679K
DO228952
LICA
ICGC
VTPQTS
DEG_SCF_FBW7_1
0.6195
p.A681E
DO228985
LICA
ICGC
VTPQTS
DEG_SCF_FBW7_1
0.3056
p.W682R
DO229259
THCA
ICGC
VTPQTS
DEG_SCF_FBW7_1
0.2778
p.L683M
TCGA-B5-A3FC
UCEC
TCGA
VTPQTS
DEG_SCF_FBW7_1
0.25
p.L683M
DO41871
UCEC
ICGC
VTPQTS
DEG_SCF_FBW7_1
0.25
p.E672Q
TCGA-EA-A3HU
CESC
TCGA
VTPQTS
DEG_SCF_FBW7_1
0.25
p.E672Q
DO6320
CESC
ICGC
VTPQTS
DEG_SCF_FBW7_1
0.25
p.P685T
TCGA-CK-5916
COAD
TCGA
VTPQTS
DEG_SCF_FBW7_1
0.1944
p.P685T
DO8786
COAD
ICGC
VTPQTS
DEG_SCF_FBW7_1
0.1944
p.P685L
TCGA-CM-6677
COAD
TCGA
VTPQTS
DEG_SCF_FBW7_1
0.1944
p.P685L
DO8570
COAD
ICGC
VTPQTS
DEG_SCF_FBW7_1
0.1944
p.E689K
TCGA-FV-A4ZP
LIHC
TCGA
VTPQTS
DEG_SCF_FBW7_1
0.0833
p.E689K
DO44911
LIHC
ICGC
VTPQTS
DEG_SCF_FBW7_1
0.0833
Showing 1 to 13 of 13 entries
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Drug responses associated with CHUK mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
SIDM00463
ALL|lymphoblastic_T_cell_leukaemia
p.V155A (No)
GDSC
BMS-345541
3.6105
SIDM00451
ALL|lymphoblastic_T_cell_leukaemia
p.A628V (No)
GDSC
BMS-345541
1.592
SIDM00893
BRCA|breast
p.D102fs*20 (No)
GDSC
BMS-345541
23.0947
SIDM00841
COREAD|large_intestine
p.W742* (No)
GDSC
BMS-345541
8.5828
SIDM00781
COREAD|large_intestine
p.A451V (No)
GDSC
BMS-345541
13.9312
SIDM00214
COREAD|large_intestine
p.V155A (No)
GDSC
BMS-345541
19.0299
SIDM00498
COREAD|large_intestine
p.P298A (No)
GDSC
BMS-345541
43.4049
SIDM00217
COREAD|large_intestine
p.V211A (No)
GDSC
BMS-345541
12.3874
SIDM00217
COREAD|large_intestine
p.V155A (No)
GDSC
BMS-345541
12.3874
SIDM00359
COREAD|large_intestine
p.A244V (No)
GDSC
BMS-345541
27.0417
SIDM00487
COREAD|large_intestine
p.M507fs*17 (No)
GDSC
BMS-345541
11.0835
SIDM00487
COREAD|large_intestine
p.E712G (No)
GDSC
BMS-345541
11.0835
SIDM00136
COREAD|large_intestine
p.I619T (No)
GDSC
BMS-345541
19.0426
SIDM00217
COREAD|large_intestine
p.R646fs*22 (No)
GDSC
BMS-345541
12.3874
SIDM00193
COREAD|large_intestine
p.R104* (No)
GDSC
BMS-345541
26.5606
SIDM00193
COREAD|large_intestine
p.E82* (No)
GDSC
BMS-345541
26.5606
SIDM00896
DLBC|B_cell_lymphoma
p.E496D (No)
GDSC
BMS-345541
6.7826
SIDM01029
ESCA|oesophagus
p.Q174H (No)
GDSC
BMS-345541
11.2159
SIDM00444
ESCA|oesophagus
p.R664W (Yes)
GDSC
BMS-345541
5.2375
SIDM00937
HNSC|head_and_neck
p.K296E (No)
GDSC
BMS-345541
10.6674
SIDM00375
HNSC|head_and_neck
p.V155A (No)
GDSC
BMS-345541
36.1435
SIDM00589
HNSC|head_and_neck
p.M507V (No)
GDSC
BMS-345541
20.2693
SIDM00355
LUAD|lung_NSCLC_adenocarcinoma
p.L7fs*32 (No)
GDSC
BMS-345541
206.2075
SIDM00079
OV|ovary
p.I150fs*12 (No)
GDSC
BMS-345541
10.6168
SIDM00533
PAAD|pancreas
p.P239L (No)
GDSC
BMS-345541
17.8822
Showing 1 to 25 of 38 entries
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All proteins holding degron of VTPQTS
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15111
Inhibitor of nuclear factor kappa-B kinase subunit alpha
DEG_SCF_FBW7_1
675:680
VTPQTS
FBXW7
0.7388
More...
Q12889
Oviduct-specific glycoprotein
DEG_SCF_FBW7_1
655:660
VTPQTS
FBXW7
0.993
More...
Showing 1 to 2 of 2 entries
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