DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTPQTS
Uniprot ID:
O15111
Source protein:
Inhibitor of nuclear factor kappa-B kinase subunit alpha
Source gene:
CHUK
Class:
DEG_SCF_FBW7_1
Location:
675:680
E3 ligase:
FBXW7
DEGRON score:
0.7388
ASA_SCORE:
84.65
COIL:
0.8462
CONS_SCORE:
0.2706
DSS_SCORE:
0.477
HELIX:
0.121
FCONS_SCORE:
0.8904
RIG_SCORE:
0.7073
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L683M
TCGA-B5-A3FC
UCEC
TCGA
VTPQTS
DEG_SCF_FBW7_1
0.25
p.L683M
DO41871
UCEC
ICGC
VTPQTS
DEG_SCF_FBW7_1
0.25
p.P685T
TCGA-CK-5916
COAD
TCGA
VTPQTS
DEG_SCF_FBW7_1
0.1944
p.P685T
DO8786
COAD
ICGC
VTPQTS
DEG_SCF_FBW7_1
0.1944
p.P685L
TCGA-CM-6677
COAD
TCGA
VTPQTS
DEG_SCF_FBW7_1
0.1944
p.P685L
DO8570
COAD
ICGC
VTPQTS
DEG_SCF_FBW7_1
0.1944
p.E672Q
TCGA-EA-A3HU
CESC
TCGA
VTPQTS
DEG_SCF_FBW7_1
0.25
p.E672Q
DO6320
CESC
ICGC
VTPQTS
DEG_SCF_FBW7_1
0.25
p.E689K
TCGA-FV-A4ZP
LIHC
TCGA
VTPQTS
DEG_SCF_FBW7_1
0.0833
p.E689K
DO44911
LIHC
ICGC
VTPQTS
DEG_SCF_FBW7_1
0.0833
p.T679K
DO228952
LICA
ICGC
VTPQTS
DEG_SCF_FBW7_1
0.6195
p.A681E
DO228985
LICA
ICGC
VTPQTS
DEG_SCF_FBW7_1
0.3056
p.W682R
DO229259
THCA
ICGC
VTPQTS
DEG_SCF_FBW7_1
0.2778
Drug responses associated with CHUK mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
SIDM00533
PAAD|pancreas
p.P239L (No)
GDSC
BMS-345541
17.8822
SIDM00841
COREAD|large_intestine
p.W742* (No)
GDSC
BMS-345541
8.5828
SIDM01029
ESCA|oesophagus
p.Q174H (No)
GDSC
BMS-345541
11.2159
SIDM01135
PAAD|pancreas
p.M65L (No)
GDSC
BMS-345541
23.7404
SIDM00463
ALL|lymphoblastic_T_cell_leukaemia
p.V155A (No)
GDSC
BMS-345541
3.6105
SIDM00355
LUAD|lung_NSCLC_adenocarcinoma
p.L7fs*32 (No)
GDSC
BMS-345541
206.2075
SIDM00683
PRAD|prostate
p.I590T (No)
GDSC
BMS-345541
17.3084
SIDM00683
PRAD|prostate
p.M318T (No)
GDSC
BMS-345541
17.3084
SIDM00937
HNSC|head_and_neck
p.K296E (No)
GDSC
BMS-345541
10.6674
SIDM00896
DLBC|B_cell_lymphoma
p.E496D (No)
GDSC
BMS-345541
6.7826
SIDM00797
SKCM|melanoma
p.S320F (No)
GDSC
BMS-345541
14.3175
SIDM00781
COREAD|large_intestine
p.A451V (No)
GDSC
BMS-345541
13.9312
SIDM00893
BRCA|breast
p.D102fs*20 (No)
GDSC
BMS-345541
23.0947
SIDM00214
COREAD|large_intestine
p.V155A (No)
GDSC
BMS-345541
19.0299
SIDM00377
UNCLASSIFIED|uterus
p.V155A (No)
GDSC
BMS-345541
14.6187
SIDM00516
SKCM|melanoma
p.E585A (No)
GDSC
BMS-345541
5.2802
SIDM00498
COREAD|large_intestine
p.P298A (No)
GDSC
BMS-345541
43.4049
SIDM00619
THCA|thyroid
p.K109N (No)
GDSC
BMS-345541
5.7765
SIDM00079
OV|ovary
p.I150fs*12 (No)
GDSC
BMS-345541
10.6168
SIDM00217
COREAD|large_intestine
p.V211A (No)
GDSC
BMS-345541
12.3874
SIDM00217
COREAD|large_intestine
p.V155A (No)
GDSC
BMS-345541
12.3874
SIDM00740
UNCLASSIFIED|lung_NSCLC_adenocarcinoma
p.S263C (No)
GDSC
BMS-345541
17.8406
SIDM00359
COREAD|large_intestine
p.A244V (No)
GDSC
BMS-345541
27.0417
SIDM00737
UNCLASSIFIED|lung_NSCLC_not_specified
p.R143* (No)
GDSC
BMS-345541
34.528
SIDM00651
UNCLASSIFIED|lung_NSCLC_large_cell
p.R646fs*22 (No)
GDSC
BMS-345541
15.1746
SIDM00375
HNSC|head_and_neck
p.V155A (No)
GDSC
BMS-345541
36.1435
SIDM00589
HNSC|head_and_neck
p.M507V (No)
GDSC
BMS-345541
20.2693
SIDM00422
UNCLASSIFIED|Hodgkin_lymphoma
p.E704K (No)
GDSC
BMS-345541
13.3385
SIDM00487
COREAD|large_intestine
p.M507fs*17 (No)
GDSC
BMS-345541
11.0835
SIDM00487
COREAD|large_intestine
p.E712G (No)
GDSC
BMS-345541
11.0835
SIDM00136
COREAD|large_intestine
p.I619T (No)
GDSC
BMS-345541
19.0426
SIDM00582
PAAD|pancreas
p.K389* (No)
GDSC
BMS-345541
14.9265
SIDM00217
COREAD|large_intestine
p.R646fs*22 (No)
GDSC
BMS-345541
12.3874
SIDM00451
ALL|lymphoblastic_T_cell_leukaemia
p.A628V (No)
GDSC
BMS-345541
1.592
SIDM00360
UNCLASSIFIED|pancreas
p.P548S (No)
GDSC
BMS-345541
68.6692
SIDM00444
ESCA|oesophagus
p.R664W (Yes)
GDSC
BMS-345541
5.2375
SIDM00193
COREAD|large_intestine
p.R104* (No)
GDSC
BMS-345541
26.5606
SIDM00193
COREAD|large_intestine
p.E82* (No)
GDSC
BMS-345541
26.5606
All proteins holding degron of VTPQTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15111
Inhibitor of nuclear factor kappa-B kinase subunit alpha
DEG_SCF_FBW7_1
675:680
VTPQTS
FBXW7
0.7388
More...
Q12889
Oviduct-specific glycoprotein
DEG_SCF_FBW7_1
655:660
VTPQTS
FBXW7
0.993
More...