DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
YKENM
Uniprot ID:
P20929
Source protein:
Nebulin
Source gene:
NEB
Class:
DEG_APCC_KENBOX_2
Location:
6278:6282
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8593
ASA_SCORE:
90.3
COIL:
0.4348
CONS_SCORE:
0.4556
DSS_SCORE:
0.4774
HELIX:
0.4874
FCONS_SCORE:
1.0379
RIG_SCORE:
0.7314
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.W6276G
TCGA-53-7624
LUAD
TCGA
YKENM
DEG_APCC_KENBOX_2
0.2778
p.Q6275K
TCGA-AB-2871
LAML
TCGA
YKENM
DEG_APCC_KENBOX_2
0.25
p.E6281K
TCGA-EB-A4IS
SKCM
TCGA
YKENM
DEG_APCC_KENBOX_2
0.7022
p.E6281K
DO47281
SKCM
ICGC
YKENM
DEG_APCC_KENBOX_2
0.7022
p.R6270Q
TCGA-EO-A22R
UCEC
TCGA
YKENM
DEG_APCC_KENBOX_2
0.1111
p.Y6272H
TCGA-F7-A624
HNSC
TCGA
YKENM
DEG_APCC_KENBOX_2
0.1667
p.Y6272H
DO44440
HNSC
ICGC
YKENM
DEG_APCC_KENBOX_2
0.1667
p.E6280Q
DO219007
BLCA
ICGC
YKENM
DEG_APCC_KENBOX_2
0.6744
p.Y6278F
DO231940
LICA
ICGC
YKENM
DEG_APCC_KENBOX_2
0.7528
p.R6268S
DO231951
LICA
ICGC
YKENM
DEG_APCC_KENBOX_2
0.0556
p.S6274R
DO229038
LICA
ICGC
YKENM
DEG_APCC_KENBOX_2
0.2222
p.K6279R
DO52021
LUSC
ICGC
YKENM
DEG_APCC_KENBOX_2
0.7237
p.R6268H
DO48889
PBCA
ICGC
YKENM
DEG_APCC_KENBOX_2
0.0556
p.E6280V
DO37831
SKCM
ICGC
YKENM
DEG_APCC_KENBOX_2
0.7693
p.S6275L
DO42793
UCEC
ICGC
YKENM
DEG_APCC_KENBOX_2
0.25
p.R6287C
SIDM02077
Colorectal Carcinoma
GDSC
YKENM
DEG_APCC_KENBOX_2
0.1944
p.N6272K
HCC70
breast
COSMIC
YKENM
DEG_APCC_KENBOX_2
0.1667
Drug responses associated with NEB mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of YKENM
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P20929
Nebulin
DEG_APCC_KENBOX_2
6278:6282
YKENM
APC,CDC20,FZR1
0.8593
More...
P20929
Nebulin
DEG_APCC_KENBOX_2
6371:6375
YKENM
APC,CDC20,FZR1
0.5332
More...