DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
YKENM
Uniprot ID:
P20929
Source protein:
Nebulin
Source gene:
NEB
Class:
DEG_APCC_KENBOX_2
Location:
6371:6375
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5332
ASA_SCORE:
89
COIL:
0.5334
CONS_SCORE:
0.3909
DSS_SCORE:
0.5722
HELIX:
0.341
FCONS_SCORE:
0.9791
RIG_SCORE:
0.7412
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E6372V
TCGA-AX-A0J0
UCEC
TCGA
YKENM
DEG_APCC_KENBOX_2
0.7693
p.Y6374H
TCGA-BS-A0UF
UCEC
TCGA
YKENM
DEG_APCC_KENBOX_2
0.7229
p.N6373S
TCGA-CA-6717
COAD
TCGA
YKENM
DEG_APCC_KENBOX_2
0.7069
p.N6373S
DO8264
COAD
ICGC
YKENM
DEG_APCC_KENBOX_2
0.7069
p.E6372K
TCGA-EE-A3J5
SKCM
TCGA
YKENM
DEG_APCC_KENBOX_2
0.7022
p.S6361N
DO228306
BRCA
ICGC
YKENM
DEG_APCC_KENBOX_2
0.0556
p.N6373K
DO233170
GACA
ICGC
YKENM
DEG_APCC_KENBOX_2
0.6918
p.N6373Y
DO228203
LICA
ICGC
YKENM
DEG_APCC_KENBOX_2
0.7059
p.P6380Q
DO23774
LUAD
ICGC
YKENM
DEG_APCC_KENBOX_2
0.1944
p.P6380Q
DO47578
SKCM
ICGC
YKENM
DEG_APCC_KENBOX_2
0.1944
p.P6382H
DO37487
SKCM
ICGC
YKENM
DEG_APCC_KENBOX_2
0.1389
p.E6372G
SIDM00193
Colorectal Carcinoma
GDSC
YKENM
DEG_APCC_KENBOX_2
0.7199
p.E6372G
ACH-000991
Colon/Colorectal Cancer
CCLE
YKENM
DEG_APCC_KENBOX_2
0.7199
p.E6372G
SNU-81
large_intestine
COSMIC
YKENM
DEG_APCC_KENBOX_2
0.7199
p.P6380L
SNU-1040
large_intestine
COSMIC
YKENM
DEG_APCC_KENBOX_2
0.1944
p.V6369I
MDA-MB-231
breast
COSMIC
YKENM
DEG_APCC_KENBOX_2
0.2778
Drug responses associated with NEB mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of YKENM
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P20929
Nebulin
DEG_APCC_KENBOX_2
6278:6282
YKENM
APC,CDC20,FZR1
0.8593
More...
P20929
Nebulin
DEG_APCC_KENBOX_2
6371:6375
YKENM
APC,CDC20,FZR1
0.5332
More...