DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
YKENQ
Uniprot ID:
Q9H967
Source protein:
WD repeat-containing protein 76
Source gene:
WDR76
Class:
DEG_APCC_KENBOX_2
Location:
24:28
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9598
ASA_SCORE:
108.22
COIL:
0.5626
CONS_SCORE:
0.1653
DSS_SCORE:
0.3583
HELIX:
0.4108
FCONS_SCORE:
1.0496
RIG_SCORE:
0.7804
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L35V
TCGA-A8-A07U
BRCA
TCGA
YKENQ
DEG_APCC_KENBOX_2
0.1389
p.Q18K
TCGA-FS-A1ZP
SKCM
TCGA
YKENQ
DEG_APCC_KENBOX_2
0.1667
p.Q18K
DO37703
SKCM
ICGC
YKENQ
DEG_APCC_KENBOX_2
0.1667
p.S38C
DO51891
BLCA
ICGC
YKENQ
DEG_APCC_KENBOX_2
0.0556
p.K19N
DO6308
CESC
ICGC
YKENQ
DEG_APCC_KENBOX_2
0.1944
p.K25T
DO222762
COCA
ICGC
YKENQ
DEG_APCC_KENBOX_2
0.7306
p.R16L
DO229038
LICA
ICGC
YKENQ
DEG_APCC_KENBOX_2
0.1111
p.T25S
DO45549
LUSC
ICGC
YKENQ
DEG_APCC_KENBOX_2
0.7116
p.V15M
DO47469
SKCM
ICGC
YKENQ
DEG_APCC_KENBOX_2
0.0833
p.S38T
DO38328
STAD
ICGC
YKENQ
DEG_APCC_KENBOX_2
0.0556
p.K18N
DO50075
UCEC
ICGC
YKENQ
DEG_APCC_KENBOX_2
0.1667
p.K24T
DO41542
UCEC
ICGC
YKENQ
DEG_APCC_KENBOX_2
0.7306
p.M19I
SIDM00573
Glioblastoma
GDSC
YKENQ
DEG_APCC_KENBOX_2
0.1944
p.M19I
ACH-001606
Brain Cancer
CCLE
YKENQ
DEG_APCC_KENBOX_2
0.1944
p.M19I
no-11
central_nervous_system
COSMIC
YKENQ
DEG_APCC_KENBOX_2
0.1944
p.R16Q
SIDM01343
Gastric Carcinoma
GDSC
YKENQ
DEG_APCC_KENBOX_2
0.1111
p.R16Q
ACH-000764
Gastric Cancer
CCLE
YKENQ
DEG_APCC_KENBOX_2
0.1111
p.K23N
ACH-002366
Non-Cancerous
CCLE
YKENQ
DEG_APCC_KENBOX_2
0.3056
Drug responses associated with WDR76 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of YKENQ
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9H967
WD repeat-containing protein 76
DEG_APCC_KENBOX_2
24:28
YKENQ
APC,CDC20,FZR1
0.9598
More...
Q6S8J7
POTE ankyrin domain family member A
DEG_APCC_KENBOX_2
286:290
YKENQ
APC,CDC20,FZR1
0.8045
More...