Gene: RFC1

Basic information

Tag Content
Uniprot ID A0A2I3TIE6
Entrez ID
Genbank protein ID
Genbank nucleotide ID
Ensembl protein ID ENSPTRP00000089036
Ensembl nucleotide ID ENSPTRG00000015991
Gene name Replication factor C subunit 1
Gene symbol RFC1
Organism Pan troglodytes
NCBI taxa ID 9598
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MDIRKFFGVI PGGKKLVSET VKKNEKTKSD EETLKAKKGI KEIKVNSSRK EDDFKQKQPS 60
KKKRIIYDSD SESEETLQVK NAKKPPEKLP VSSKPGKISR QDPVTYISET DEEDDFMCKK 120
AASKSKENGR STNSHLGTSN MKKNEENTKT KNKPLSPIKL TPTSVLDYFG TGSVQRSNKK 180
MVASKRKELS QNTDESGLQD EAIAKQLQLD EDAELERQLH EDEEFARTLA MLDEEPKTKK 240
ARKDTEAGET FSSVQANLSK AEKHKYLHKV KTAQVSDERK SYSPRKQSKY ESSKESQQHS 300
KSSADKIGEV SSPKASSKLA IMKRKEESSY KEIEPVASKR KENAIKLKGE TKTPKKTKSS 360
PAKKESVSPE DSEKKRTNYQ AYRSYLNREG PKALGSKEIP KGAENCLEGL IFVITGVLES 420
IERDEAKSLI ERYGGKVTGN VSKKTNYLVM GRDSGQSKSD KAAALGTKII DEDGLLNLIR 480
TMPGKKSKYE IAVETEMKKE SKLERTPQKK VQGKRKISPS KKESESKKSR PTSKRDSLAK 540
TIKKETDVFW KSLDFKEQVA EETSGDSKAR NLADDSSENK VENLLWVDKY KPTSLKTIIG 600
QQGDQSCANK LLRWLRNWQK SSSEDKKHAK FGKFSGKDDG SSFKAALLSG PPGVGKTTTA 660
SLVCQELGYS YVELNASDTR SKSSLKAIVA ESLNNTSIKG FYSNGAASSV STKHALIMDE 720
VDGMAGNEDR GGIQELIGLI KHTKIPIICM CNDRNHPKIR SLVHYCFDLR FQRPRVEQIK 780
GAMMSIAFKE GLKIPPPAMN EIILGANQDI RQVLHNLSMW CARSKALTYD QAKADSHRAK 840
KDIKMGPFDV ARKVFAAGEE TAHMSLVDKS DLFFHDYSIA PLFVQENYIH VKPVAAGGDM 900
KKHLMLLSRA ADSICDGDLV DSQIRSKQNW SLLPAQAIYA SVLPGELMRG YMTQFPTFPS 960
WLGKHSSTGK HDRIVQDLAL HMSLRTYSSK RTVNMDYLSL LRDALVQPLT SQGVDGVQDV 1020
VALMDTYYLM KEDFENIMEI SSWGGKPSPF SKLDPKVKAA FTRAYNKEAH LTPYSLQAIK 1080
ASRHSTSPSL DSEYNEELNE DDSQSDEKDQ DAIETDAMIK KKRTVNGESK ND 1132

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologRFC1479112E2QW76Canis lupus familiarisPredictionMore>>
1:1 orthologRFC1102170128A0A452FBS8Capra hircusPredictionMore>>
1:1 orthologRFC15981P35251Homo sapiensPublicationMore>>
1:1 orthologRfc119687Q5U4B1Mus musculusPredictionMore>>
1:1 orthologRFC1A0A2I3TIE6Pan troglodytesPredictionMore>>
1:1 orthologRfc1D3ZFT1Rattus norvegicusPredictionMore>>
1:1 orthologrfc1100037336F1Q5P6Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0005663 DNA replication factor C complex
GO:0005634 nucleus
GO:0005524 ATP binding
GO:0003689 DNA clamp loader activity
GO:0006281 DNA repair
GO:0006260 DNA replication

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0067 ATP-binding
KW-0235 DNA replication
KW-0547 Nucleotide-binding
KW-0539 Nucleus
KW-1185 Reference proteome

Interpro

InterPro ID InterPro Term
IPR003593 AAA+_ATPase
IPR003959 ATPase_AAA_core
IPR001357 BRCT_dom
IPR036420 BRCT_dom_sf
IPR008921 DNA_pol3_clamp-load_cplx_C
IPR013725 DNA_replication_fac_RFC1_C
IPR027417 P-loop_NTPase
IPR012178 RFC1

PROSITE

PROSITE ID PROSITE Term
PS50172 BRCT

Pfam

Pfam ID Pfam Term
PF00004 AAA
PF00533 BRCT
PF08519 RFC1