Gene: RFC1

Basic information

Tag Content
Uniprot ID A0A452FBS8
Entrez ID 102170128
Genbank protein ID
Genbank nucleotide ID XM_013964589.2
Ensembl protein ID ENSCHIP00000021706
Ensembl nucleotide ID ENSCHIG00000019925
Gene name Replication factor C subunit 1
Gene symbol RFC1
Organism Capra hircus
NCBI taxa ID 9925
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MDIRKFFGVI PSGKKLVSET VKKNEKTKSA EESLKAKKGI KEIKVNNSCT EDEIKPKQSN 60
KKKRIIYDSD SESEETVQVK NAKKRPEKLP LSSKPAKIQQ QDPVTYISET DEDDDFVCKK 120
TASKLKENGG STNSYFGASN MKKNEENTKT KNKPLSPIKL TPTSVLDYFG TGSIQRSDKK 180
MVASRRKEPS QNADDSRLND EAIAKQLQLD EDAELERQLH EDEEFARTLA MLDEEPKTKK 240
AEKAAEERET FSSVQVNLRK AEKLKYPHKE QFSDERKNFS PKKQTKFEGS RESQQRSRSS 300
AHKTGETSPK ASSKLALLKK KEESSNKETE SMASKRKENV IELKETRTPK KIKSSPAKKE 360
SVSPDDAEKR RTNYQAYRSY LNREGPKALG SKEIPKGAEN CLEGLTFVIT GVLESIERDE 420
AKSLIERYGG KVTGNVSKKT NYLVMGRDSG QSKSDKAAAL GTNIIDEDGL LNLIRTMPGK 480
KSKYEIAAEA EMKKEKSKLE RTPQKNDQGK RKSSPTKKES ESKKCKLTPK RESSIKSLKK 540
EASVSQRGLD FKEQAAEEAN GDSRARNLAD DSRESKVESL LWVDKYKPTS LKTIIGQQGD 600
QSCANKLLRW LQNWHKSPSE DKKHAKFGKF AGKDDGSSFK AALLSGPPGV GKTTTASLVC 660
QELGYSYVEL NASDTRSKNS LKEIVAESLN NTSIKGFFSS GTVHSVGTRH ALIMDEVDGM 720
AGNEDRGGIQ ELIGLIKHTK IPIICMCNDR NHPKIRSLVH YCFDLRFQRP RVEQIKGAMM 780
SIAFKEGLKI PPPAMNEIIL GANQDIRQVL HNLNMWCARN KALTYDQAKA DSHRAKKDIK 840
LGPFDVARKV FVTGEETAHM SLMDKSDLFF HDYSIAPLFV QENYIHVKPV AAGGDMKKHL 900
MLLSRAADSI CDGDLVDRQI RNKQNWSLLP TQAIYASVLP GELMRGYMTQ FPTFPSWLGK 960
YSSMGKHDRT VQDLALHMSL RTYSSKRTVN VDYLSHLRDA LVQPLASQGI EGVQDVVALM 1020
DAYYLMKDDF ENIMEISNWG GRPSPFSKLD PKVKAAFTRA YNKEVHLTPY SLQAVKTHRH 1080
STGPSLDSEY SEELNEDDSQ SDEKDQDTLE TDAMIKKKTK SSKPSKSEKD KESRKGKGKS 1140
SKK 1143

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologRFC1479112E2QW76Canis lupus familiarisPredictionMore>>
1:1 orthologRFC1102170128A0A452FBS8Capra hircusPredictionMore>>
1:1 orthologRFC15981P35251Homo sapiensPublicationMore>>
1:1 orthologRfc119687Q5U4B1Mus musculusPredictionMore>>
1:1 orthologRFC1A0A2I3TIE6Pan troglodytesPredictionMore>>
1:1 orthologRfc1D3ZFT1Rattus norvegicusPredictionMore>>
1:1 orthologrfc1100037336F1Q5P6Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0005663 DNA replication factor C complex
GO:0031391 Elg1 RFC-like complex
GO:0005654 nucleoplasm
GO:0005524 ATP binding
GO:0003689 DNA clamp loader activity
GO:0061860 DNA clamp unloader activity
GO:0006281 DNA repair
GO:0006260 DNA replication

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0067 ATP-binding
KW-0235 DNA replication
KW-0547 Nucleotide-binding
KW-0539 Nucleus
KW-1185 Reference proteome

Interpro

InterPro ID InterPro Term
IPR003593 AAA+_ATPase
IPR003959 ATPase_AAA_core
IPR001357 BRCT_dom
IPR036420 BRCT_dom_sf
IPR008921 DNA_pol3_clamp-load_cplx_C
IPR013725 DNA_replication_fac_RFC1_C
IPR027417 P-loop_NTPase
IPR012178 RFC1

PROSITE

PROSITE ID PROSITE Term
PS50172 BRCT

Pfam

Pfam ID Pfam Term
PF00004 AAA
PF00533 BRCT
PF08519 RFC1