Gene: PAX9

Basic information

Tag Content
Uniprot ID A0A452EZP5
Entrez ID 102171104
Genbank protein ID
Genbank nucleotide ID XM_018066320.1; XM_018066321.1;
Ensembl protein ID ENSCHIP00000017561
Ensembl nucleotide ID ENSCHIG00000017353
Gene name Paired domain-containing protein
Gene symbol PAX9
Organism Capra hircus
NCBI taxa ID 9925
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MEPAFGEVNQ LGGVFVNGRP LPNAIRLRIV ELAQLGIRPC DISRQLRVSH GCVSKILARY 60
NETGSILPGA IGGSKPRVTT PTVVKHIRTY KQRDPGIFAW EIRDRLLADG VCDKYNVPSV 120
SSISRILRNK IGNLAQQGHY DSYKQHQPAP QPALPYNHIY SYPSPITAAA AKVPTPPGVP 180
AIPGSVAMPR TWPSSHSVTD ILGIRSITDQ GVSDSSPYHS PKVEEWSSLG RSNFPAAAPH 240
AVNGLEKGAL EQEAKYAQAP NGLPAVSSFV SAASMAPYPT PAQVSPYMTY SAAPSGYVAG 300
HGWQHASGTP LSPHNCDIPA SLAFKGMQAA REGSHSVTAS AL 342

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologPAX9540196F1MFP5Bos taurusPredictionMore>>
1:1 orthologPAX9102171104A0A452EZP5Capra hircusPredictionMore>>
1:1 orthologPAX95083P55771CPO,CL/PHomo sapiensPublicationMore>>
1:1 orthologPax918511P47242CPO,CLPE14.5Mus musculusPublicationMore>>
1:1 orthologPAX9737458Q2VL62Pan troglodytesPredictionMore>>
1:1 orthologPAX9100156821A0A480DYY0Sus scrofaPredictionMore>>
1:1 orthologPax9R9PXT8Rattus norvegicusPredictionMore>>
1:1 orthologpax930558Q98865Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0005634 nucleus
GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding
GO:0071363 cellular response to growth factor stimulus
GO:0007492 endoderm development
GO:0060325 face morphogenesis
GO:0045892 negative regulation of transcription, DNA-templated
GO:0042476 odontogenesis
GO:0042481 regulation of odontogenesis

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0217 Developmental protein
KW-0238 DNA-binding
KW-0539 Nucleus
KW-0563 Paired box
KW-1185 Reference proteome
KW-0804 Transcription
KW-0805 Transcription regulation

Interpro

InterPro ID InterPro Term
IPR009057 Homeobox-like_sf
IPR043182 PAIRED_DNA_bd_dom
IPR001523 Paired_dom
IPR033204 PAX9
IPR036388 WH-like_DNA-bd_sf

PROSITE

PROSITE ID PROSITE Term
PS00034 PAIRED_1
PS51057 PAIRED_2

Pfam

Pfam ID Pfam Term
PF00292 PAX