| Tag | Content |
|---|---|
| Uniprot ID | A2T733 |
| Entrez ID | 467546 |
| Genbank protein ID | ABM91988.1 |
| Genbank nucleotide ID | NM_001081486.1 |
| Ensembl protein ID | ENSPTRP00000011401 |
| Ensembl nucleotide ID | ENSPTRG00000006687 |
| Gene name | Homeobox protein goosecoid |
| Gene symbol | GSC |
| Organism | Pan troglodytes |
| NCBI taxa ID | 9598 |
| Cleft type | |
| Developmental stage | |
| Data sources | Homology search |
| Reference | |
| Functional description | Regulates chordin (CHRD). May play a role in spatial programing within discrete embryonic fields or lineage compartments during organogenesis. In concert with NKX3-2, plays a role in defining the structural components of the middle ear; required for the development of the entire tympanic ring (By similarity). Probably involved in the regulatory networks that define neural crest cell fate specification and determine mesoderm cell lineages in mammals (By similarity). |
| Sequence | MPASMFSIDN ILAARPRCKD SVLPVAPSAA APVVFPALHG DSLYGASGGA SSDYGAFYPR 60 PVAPGGAGLP AAVSGSRLGY NNYFYGQLHV QAAPVGPACC GAVPPLGAQQ CSCVPTPPGY 120 EGPGSVLVSP VPHQMLPYMN VGTLSRTELQ LLNQLHCRRK RRHRTIFTDE QLEALENLFQ 180 ETKYPDVGTR EQLARKVHLR EEKVEVWFKN RRAKWRRQKR SSSEESENAE KWNKTSSSKA 240 SPEKREEEGK SDLDSDS 257 |
Abbreviation :
CLO : cleft lip only. CPO : cleft palate only.
CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.
| Relation | Gene symbol | Entrez ID | UniProt ID | Cleft type | Developmental stage | Species | Evidence | Details |
|---|---|---|---|---|---|---|---|---|
| 1:1 ortholog | GSC | 514862 | E1BB15 | Bos taurus | Prediction | More>> | ||
| 1:1 ortholog | GSC | 102185957 | A0A452FMK4 | Capra hircus | Prediction | More>> | ||
| 1:1 ortholog | GSC | 145258 | P56915 | Homo sapiens | Prediction | More>> | ||
| 1:1 ortholog | Gsc | 14836 | Q02591 | CPO | E12.5, E13.75, E13.5, E14.5, E15.5 | Mus musculus | Publication | More>> |
| 1:1 ortholog | GSC | 467546 | A2T733 | Pan troglodytes | Prediction | More>> | ||
| 1:1 ortholog | GSC | 397342 | F1SCC4 | Sus scrofa | Prediction | More>> | ||
| 1:1 ortholog | Gsc | 317715 | G3V7E7 | Rattus norvegicus | Prediction | More>> | ||
| 1:1 ortholog | gsc | Q7ZZR4 | Danio rerio | Prediction | More>> |
| GO ID | GO Term |
|---|---|
| GO:0005634 | nucleus |
| GO:0005667 | transcription factor complex |
| GO:0001227 | DNA-binding transcription repressor activity, RNA polymerase II-specific |
| GO:0000978 | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
| GO:0001103 | RNA polymerase II repressing transcription factor binding |
| GO:0001085 | RNA polymerase II transcription factor binding |
| GO:0021904 | dorsal/ventral neural tube patterning |
| GO:0048704 | embryonic skeletal system morphogenesis |
| GO:0030900 | forebrain development |
| GO:0042474 | middle ear morphogenesis |
| GO:0048644 | muscle organ morphogenesis |
| GO:0030178 | negative regulation of Wnt signaling pathway |
| GO:0014036 | neural crest cell fate specification |
| GO:0023019 | signal transduction involved in regulation of gene expression |
| Pfam ID | Pfam Term |
|---|---|
| PF00046 | Homeodomain |