Gene: ugdh

Basic information

Tag Content
Uniprot ID A8WGP7
Entrez ID 116991
Genbank protein ID AAI54795.1
Genbank nucleotide ID NM_001110402.1
Ensembl protein ID ENSDARP00000004687; ENSDARP00000148007; ENSDARP00000108630;
Ensembl nucleotide ID ENSDARG00000110018; ENSDARG00000019838;
Gene name UDP-glucose 6-dehydrogenase
Gene symbol ugdh
Organism Danio rerio
NCBI taxa ID 7955
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description Involved in the biosynthesis of glycosaminoglycans; hyaluronan, chondroitin sulfate, and heparan sulfate.
Sequence
MFQIKKICCI GAGYVGGPTC SVIASMCPEI TVTVVDVNES RIKAWNSDTL PIYEPGLNEV 60
VLSCRGKNLF FSTDIDSAIK EADLVFISVN TPTKTYGMGK GRAADLKFIE ACARRIVEVS 120
DGYKIVTEKS TVPVRAAESI RRIFDANTKP SLNLQVLSNP EFLAEGTAVK DLKEPDRVLI 180
GGDETPEGQR AISALCAVYE HWVPKTRIIT TNTWSSELSK LAANAFLAQR ISSINSISAL 240
CESTGADVEE VARAIGMDQR IGSKFLKASV GFGGSCFQKD VLNLVYLCEA LNLPEVASYW 300
QQVIDMNEYQ RKRFACRIID CLFNTVTGKK IALLGFSFKK DTGDTRESSS IYISKYLMDE 360
GAKLHIYDPK VLKEQIIQDL SQPGISGDNP ERVSDLVTVT VDPYEACESA HALVICTEWD 420
MFKDLDYEKI YHKMLKPAFI FDGRRVLDHL HTQLQNVGFQ IETIGKKVMT RIPFTTSGGV 480
PRITEPPVKK SKA 493

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologUGDH281564P12378Bos taurusPredictionMore>>
1:1 orthologUGDH479107E2R311Canis lupus familiarisPredictionMore>>
1:1 orthologUGDH102171772A0A452G134Capra hircusPredictionMore>>
1:1 orthologUGDH7358O60701Homo sapiensPredictionMore>>
1:1 orthologUgdh22235O70475CPOMus musculusPublicationMore>>
1:1 orthologUGDH471171H2QPC9Pan troglodytesPredictionMore>>
1:1 orthologUGDH100627727I3LIM2Sus scrofaPredictionMore>>
1:1 orthologUgdhG3V6C4Rattus norvegicusPredictionMore>>
1:1 orthologugdh116991A8WGP7Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0005829 cytosol
GO:0005634 nucleus
GO:0051287 NAD binding
GO:0003979 UDP-glucose 6-dehydrogenase activity
GO:0003190 atrioventricular valve formation
GO:0005975 carbohydrate metabolic process
GO:0007368 determination of left/right symmetry
GO:0006024 glycosaminoglycan biosynthetic process
GO:0007507 heart development
GO:0003188 heart valve formation
GO:0090263 positive regulation of canonical Wnt signaling pathway
GO:0045880 positive regulation of smoothened signaling pathway
GO:0006065 UDP-glucuronate biosynthetic process

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0520 NAD
KW-0560 Oxidoreductase
KW-1267 Proteomics identification
KW-1185 Reference proteome

Interpro

InterPro ID InterPro Term
IPR008927 6-PGluconate_DH-like_C_sf
IPR036291 NAD(P)-bd_dom_sf
IPR017476 UDP-Glc/GDP-Man
IPR014027 UDP-Glc/GDP-Man_DH_C
IPR036220 UDP-Glc/GDP-Man_DH_C_sf
IPR014026 UDP-Glc/GDP-Man_DH_dimer
IPR001732 UDP-Glc/GDP-Man_DH_N
IPR028356 UDPglc_DH_euk

PROSITE

PROSITE ID PROSITE Term

Pfam

Pfam ID Pfam Term
PF00984 UDPG_MGDP_dh
PF03720 UDPG_MGDP_dh_C
PF03721 UDPG_MGDP_dh_N