Gene: itgav

Basic information

Tag Content
Uniprot ID B8JLK8
Entrez ID
Genbank protein ID
Genbank nucleotide ID
Ensembl protein ID ENSDARP00000044313
Ensembl nucleotide ID ENSDARG00000006314
Gene name Integrin, alpha V
Gene symbol itgav
Organism Danio rerio
NCBI taxa ID 7955
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MGKHFVRYWL WALVALFTTK RAPAFNLDIS KPTVFSGPPG SYFGFSVAFF NPDNSQLNIL 60
VGAPRANTSD QTPSAVTERG AVFSCPWQKS GTCTQIQFDS TDDRKHSNGQ QMEFKSNQWF 120
GATVRSSGDQ ILACAPLYQW STYGFSEREP VGTCYLKKGN NIVEYSPCRS KSNSPEGQGF 180
CQAGFSADFV KKNRVVIGGP GSFYWQGQLI SDDVTEVINR YNKEFLTPYS NQLSTKPAGA 240
QYDDSYLGYS VAVGDFNEDG EDDYVTGVPR GEKALGYVNI FNGRNMESMY NFTGTQMAAY 300
FGHSVAAVDV NNDGKMDLFV GAPLFMDRGS DGKLREVGQV YVYLGKGGFT FNSVIKLTGS 360
EIYARYGSSV CSVGDLNMDG YNDVAIAAPY GGPFHRGLVY IHNGRSTGPN PVASQVLEGT 420
WASVSMPSSF GYSMNGGTDV DQNGYPDLIV GAFGADKAIL YRARPVISVN TTLDISPQIL 480
NPEDKSCTLP STATKVSCFT VKYCLKASGK GAPSSLLFQV DLTLDRLKHK GAIKRVLFLY 540
NKMSHYSKNM TVNNNQGLAC EELQAYLIDD SEFRDKITPI SVFMEYSLDF KSAADKTGLL 600
PILDQSAPTN VTKQAHILLD CGEDNICKPD LKLSVVSDQN EIYIGDDNPL TLEVTAENGG 660
EGAYEADLIV TLPSQADFTA VVRNSETLSR LSCAFKKDNQ TRVVVCDLGN PMKGGTKIVA 720
GLRFSVHQLS EQDTEVKFGL QIQSTNQFNN TSNLVSVVTK LAVLAKVELR GVSAPEQVFL 780
PIANWQPKEN PVLEDDIGPL VQHIYELRNK GPSTFSKAIL DVQWPYRFNN GSLLYITKFS 840
VDGNMNCSSN RELNPLNVTS PRFLDQNDTS ASGAEGRNRH NVHRRDLEEK HGEENLEILD 900
CGNAECQEIK CFVGRLEKGQ SAILFIYSRL AVNTFLKAES QNKSYIVRSS ASFSVIEMPY 960
KNLNPELPTS TQSASLKVIW NSENPQPVPG WVVALAVLAG LLLLALLIFV MYKLGFFNRV 1020
RPPQEDRTEK EQLQPQENGD RNTEA 1045

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologITGAV281875A0A3Q1MXS2Bos taurusPredictionMore>>
1:1 orthologITGAVA0A452E162Capra hircusPredictionMore>>
1:1 orthologITGAV3685P06756Homo sapiensPredictionMore>>
1:1 orthologItgav16410P43406CPOMus musculusPublicationMore>>
1:1 orthologITGAVA0A2I3SM65Pan troglodytesPredictionMore>>
1:1 orthologITGAVF1RYJ4Sus scrofaPredictionMore>>
1:1 orthologITGAV100008956A0A5F9D0E2Oryctolagus cuniculusPredictionMore>>
1:1 orthologItgavA0A0G2JVZ6Rattus norvegicusPredictionMore>>
1:1 orthologitgavB8JLK8Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0008305 integrin complex
GO:0001525 angiogenesis
GO:0090245 axis elongation involved in somitogenesis
GO:0001568 blood vessel development
GO:0007155 cell adhesion
GO:0016477 cell migration
GO:0042074 cell migration involved in gastrulation
GO:0001935 endothelial cell proliferation
GO:0007229 integrin-mediated signaling pathway
GO:0070121 Kupffer's vesicle development

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0130 Cell adhesion
KW-0325 Glycoprotein
KW-0401 Integrin
KW-0472 Membrane
KW-1267 Proteomics identification
KW-0675 Receptor
KW-1185 Reference proteome
KW-0677 Repeat
KW-0732 Signal
KW-0812 Transmembrane
KW-1133 Transmembrane helix

Interpro

InterPro ID InterPro Term
IPR013517 FG-GAP
IPR013519 Int_alpha_beta-p
IPR000413 Integrin_alpha
IPR013649 Integrin_alpha-2
IPR018184 Integrin_alpha_C_CS
IPR028994 Integrin_alpha_N
IPR032695 Integrin_dom_sf

PROSITE

PROSITE ID PROSITE Term
PS51470 FG_GAP
PS00242 INTEGRIN_ALPHA

Pfam

Pfam ID Pfam Term
PF01839 FG-GAP
PF00357 Integrin_alpha
PF08441 Integrin_alpha2
PF13517 VCBS