| Tag | Content |
|---|---|
| Uniprot ID | D3ZF61 |
| Entrez ID | 685072 |
| Genbank protein ID | EDL86852.1 |
| Genbank nucleotide ID | XM_008765785.2; XM_008765786.2; NM_001135249.1; |
| Ensembl protein ID | ENSRNOP00000017096 |
| Ensembl nucleotide ID | ENSRNOG00000012499 |
| Gene name | RCG50849 |
| Gene symbol | Rarg |
| Organism | Rattus norvegicus |
| NCBI taxa ID | 10116 |
| Cleft type | |
| Developmental stage | |
| Data sources | Homology search |
| Reference | |
| Functional description | |
| Sequence | MATNKERLFA PNALGPGSGY PGAGFPFAFP GALRGSPPFE MLSPSFRGLG QPDLPKEMAS 60 LSVETQSTSS EEMVPSSPSP PPPPRVYKPC FVCNDKSSGY HYGVSSCEGC KGFFRRSIQK 120 NMVYTCHRDK NCIINKVTRN RCQYCRLQKC FEVGMSKEAV RNDRNKKKKE VKEEGPPDNY 180 ELSPQLEELI TKVSKAHQET FPSLCQLGKY TTNSSADHRV QLDLGLWDKF SELATKCIIK 240 IVEFAKRLPG FTGLSIADQI TLLKAACLDI LMLRICTRYT PEQDTMTFSD GLTLNRTQMH 300 NAGFGPLTDL VFAFAGQLLP LEMDDTETGL LSAICLICGD RMDLEEPEKV DKLQEPLLEA 360 LRLYARRRRP SQPYMFPRML MKITDLRGIS TKGAERAITL KMEIPGPMPP LIREMLENPE 420 MFEDDSSKPG PHPKASSEDE APGSQGKRGQ SPQPDQGP 458 |
Abbreviation :
CLO : cleft lip only. CPO : cleft palate only.
CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.
| Relation | Gene symbol | Entrez ID | UniProt ID | Cleft type | Developmental stage | Species | Evidence | Details |
|---|---|---|---|---|---|---|---|---|
| 1:1 ortholog | RARG | 540425 | Q08DD4 | Bos taurus | Prediction | More>> | ||
| 1:1 ortholog | RARG | 102178513 | A0A452FTP1 | Capra hircus | Prediction | More>> | ||
| 1:1 ortholog | RARG | 5916 | P13631 | Homo sapiens | Prediction | More>> | ||
| 1:1 ortholog | Rarg | 19411 | P18911 | CPO | Mus musculus | Publication | More>> | |
| 1:1 ortholog | RARG | A0A2I3T1N3 | Pan troglodytes | Prediction | More>> | |||
| 1:1 ortholog | Rarg | 685072 | D3ZF61 | Rattus norvegicus | Prediction | More>> |
| GO ID | GO Term |
|---|---|
| GO:0042025 | host cell nucleus |
| GO:0000790 | nuclear chromatin |
| GO:0005634 | nucleus |
| GO:0090575 | RNA polymerase II transcription factor complex |
| GO:0005667 | transcription factor complex |
| GO:0003677 | DNA binding |
| GO:0003700 | DNA-binding transcription factor activity |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0098531 | ligand-activated transcription factor activity |
| GO:0004879 | nuclear receptor activity |
| GO:0030374 | nuclear receptor transcription coactivator activity |
| GO:0046965 | retinoid X receptor binding |
| GO:0000977 | RNA polymerase II regulatory region sequence-specific DNA binding |
| GO:0038023 | signaling receptor activity |
| GO:0003707 | steroid hormone receptor activity |
| GO:0008134 | transcription factor binding |
| GO:0000976 | transcription regulatory region sequence-specific DNA binding |
| GO:0008270 | zinc ion binding |
| GO:0009952 | anterior/posterior pattern specification |
| GO:0060348 | bone development |
| GO:0060349 | bone morphogenesis |
| GO:0043010 | camera-type eye development |
| GO:0030154 | cell differentiation |
| GO:1990830 | cellular response to leukemia inhibitory factor |
| GO:0071300 | cellular response to retinoic acid |
| GO:0002063 | chondrocyte development |
| GO:0031076 | embryonic camera-type eye development |
| GO:0048048 | embryonic eye morphogenesis |
| GO:0035116 | embryonic hindlimb morphogenesis |
| GO:0048568 | embryonic organ development |
| GO:0060429 | epithelium development |
| GO:0060324 | face development |
| GO:0048732 | gland development |
| GO:0002068 | glandular epithelial cell development |
| GO:0003430 | growth plate cartilage chondrocyte growth |
| GO:0003417 | growth plate cartilage development |
| GO:0070384 | Harderian gland development |
| GO:0009755 | hormone-mediated signaling pathway |
| GO:0060173 | limb development |
| GO:0007275 | multicellular organism development |
| GO:0035264 | multicellular organism growth |
| GO:0043066 | negative regulation of apoptotic process |
| GO:0061037 | negative regulation of cartilage development |
| GO:0045596 | negative regulation of cell differentiation |
| GO:0008285 | negative regulation of cell population proliferation |
| GO:0032331 | negative regulation of chondrocyte differentiation |
| GO:0000122 | negative regulation of transcription by RNA polymerase II |
| GO:0001843 | neural tube closure |
| GO:0043065 | positive regulation of apoptotic process |
| GO:0008284 | positive regulation of cell population proliferation |
| GO:0010628 | positive regulation of gene expression |
| GO:0043068 | positive regulation of programmed cell death |
| GO:0045944 | positive regulation of transcription by RNA polymerase II |
| GO:0060740 | prostate gland epithelium morphogenesis |
| GO:0010468 | regulation of gene expression |
| GO:0031641 | regulation of myelination |
| GO:0045637 | regulation of myeloid cell differentiation |
| GO:0048608 | reproductive structure development |
| GO:0033993 | response to lipid |
| GO:0032526 | response to retinoic acid |
| GO:0060041 | retina development in camera-type eye |
| GO:0003406 | retinal pigment epithelium development |
| GO:0048384 | retinoic acid receptor signaling pathway |
| GO:0060534 | trachea cartilage development |